Fig. 2
From: Benchmarking phasing software with a whole-genome sequenced cattle pedigree
Illustration of different metrics used to assess phasing quality. Illustration of the switches between true haplotypes (gold standard obtained using Mendelian rules) and inferred haplotypes (estimated by the different population-based phasing methods). The quality adjusted (QA) haplotype block length computed in this study is equal to the product between the distance between switches and the phasing yield (proportion of informative SNPs that are phased in inferred haplotypes, the informative SNPs being the SNPs that are heterozygous and phased in the true haplotypes)