Fig. 5

Distribution of polymorphic sites relative to a reconstructed (R)-(−)-Linalool Synthase reference gene. Top: Reference sequence and locations of SNPs passing quality filters. Proportion of color in each bar indicates allele frequencies across the six individuals of Oenothera harringtonii. Middle: SNP calls passing filters for six individuals of Oenothera harringtonii relative to the reference sequence. Bottom: Depth of sequencing across the reference sequence for each individual (range of depth indicated to the right). Colors indicate presence of heterozygosity. Only deduplicated transcriptome reads were used for this analysis