Table 4 The differentially expressed genes located within any of the QTL intervals for average daily weight gain in three pig breeds and multi-breed meta-analysis
Gene | log2fold change | FDRa | Breed |
|---|---|---|---|
PMAIP1 | -1.02 | 4.08e-7 | Yorkshire and Meta-analysis |
ENSSSCG00000043998 | -1.02 | 7.54e-8 | Meta-analysis |
RGS20 | -1.42 | 2.38e-2 | Yorkshire |
H1-4 | -1.37 | 6.76e-5 | Landrace |
FAM155A | -1.41 | 1.18e-2 | Yorkshire and Meta-analysis |
ENSSSCG00000017285 | -1.64 | 1.06e-3 | Yorkshire and Meta-analysis |
ENSSSCG00000049912 | -1.11 | 2.15e-3 | Yorkshire and Meta-analysis |
SLC13A2 | -1.26 | 1.98e-2 | Meta-analysis |
SEBOX | 1.32 | 7.92e-4 | Meta-analysis |
VTN | 1.19 | 1.96e-5 | Meta-analysis |
NR1D2 | -1.23 | 3.58e-16 | Yorkshire |
MNX1 | 1.39 | 8.74e-3 | Landrace |