‘Nebbiolo’ genome assembly allows surveying the occurrence and functional implications of genomic structural variations in grapevines (Vitis vinifera L.)

Table 1 Contiguity and completeness statistics for ‘Nebbiolo’ CVT 71 genome assemblies

	‘Nebbiolo’ primary assembly	‘Nebbiolo’ alternative haplotypes
Total assembly length (Mbp)	560.26	533.95
Assembly N50 (Mbp)	5.37	1.18
Total scaffolds length (Mbp)	487.09	225.01
Number of scaffolds	109	107
Number of gaps	384	247
Gaps size (Mbp)	20.51	8.68
Contigs in scaffolds	493	354
Remaining contigs	121	1,880
Remaining contigs total length (Mbp)	73.17	308.94
BUSCO statistics	C:94.8%, F:2.0%, M:3.2%	C:77.9%, F:1.9%, M:20.2%
Num. genes	35,038	32,865
Perc. repetitive content	52.9%	56.5%

For BUSCO statistics, ‘C’ refers to gene completeness, ‘F’ to fragmented genes, and ‘M’ to missing genes. ‘Nebbiolo’ primary assembly and alternative haplotypes refer to the genome assemblies obtained after haplotypic separation

ISSN: 1471-2164