Table 3 Summary of information regarding the assembly and annotation of the transcriptomes
Type | Unigene | Transcript |
|---|---|---|
Total number | 103,290 | 145,771 |
Total base | 111,998,274 | 179,479,215 |
Largest length (bp) | 28,684 | 28,684 |
Smallest length (bp) | 201 | 201 |
Average length (bp) | 1084.31 | 1231.24 |
N50 length (bp) | 2113 | 2427 |
E90N50 length (bp) | 3924 | 3562 |
Fragment mapped percent (%) | 74.543 | 85.912 |
GC percent (%) | 42.37 | 42.95 |
TransRate score | 0.38943 | 0.4383 |
BUSCO score | C:96.0% [S:88.3%; D:7.7%] | C:96.0% [S:88.3%; D:7.7%] |