Table 2 The 143 Aeromonas veronii strains in the public databases that were used in this study
Strain names | Country | Source | Level | Size (Mb) | GC % | N50 (bp) | No. of contigs | Plasmid | Ref |
|---|---|---|---|---|---|---|---|---|---|
BC88 | Australia | Human feces, dysentery | Draft | 4.60 | 58.5 | 215,763 | 155 | Â | Â |
FC951 | India | Human feces, diarrhea | Complete | 4.86 | 58.7 | N/A | 2 | 1 | Â |
126–14 | China | Human feces, diarrhea | Draft | 4.37 | 58.6 | 72,935 | 146 |  |  |
312Â M | Brazil | Human feces, gastroenteritides | Draft | 4.57 | 58.6 | 502,756 | 14 | Â | Â |
VBF557 | India | Human feces, gastroenteritides | Draft | 4.70 | 58.4 | 19,666 | 526 | Â | Â |
ERR1305902-bin.15 | Denmark | Human feces, diarrhea | Draft | 4.11 | 59.4 | 32,267 | 226 | Â | Â |
CN17A0013 | China | Human feces | Draft | 4.45 | 58.9 | 167,760 | 49 | Â | Â |
CN17A0029 | China | Human feces | Draft | 4.60 | 58.8 | 2,737,631 | 19 | Â | Â |
CN17A0031 | China | Human feces | Draft | 4.42 | 58.9 | 156,076 | 45 | Â | Â |
CN17A0036 | China | Human feces | Draft | 4.45 | 58.9 | 230,866 | 38 | Â | Â |
CN17A0040 | China | Human feces | Draft | 4.44 | 58.9 | 302,838 | 32 | Â | Â |
CN17A0049 | China | Human feces | Draft | 4.30 | 58.9 | 302,677 | 31 | Â | Â |
CN17A0054 | China | Human feces | Draft | 4.33 | 58.9 | 217,304 | 57 | Â | Â |
CN17A0059 | China | Human feces | Draft | 4.26 | 58.9 | 164,457 | 48 | Â | Â |
CN17A0067 | China | Human feces | Draft | 4.55 | 58.7 | 180,288 | 60 | Â | Â |
CN17A0087 | China | Human feces | Draft | 4.58 | 58.6 | 145,832 | 80 | Â | Â |
CN17A0093 | China | Human feces | Draft | 4.35 | 58.6 | 120,695 | 64 | Â | Â |
CN17A0097 | China | Human feces | Draft | 4.52 | 58.6 | 141,638 | 88 | Â | Â |
CN17A0102 | China | Human feces | Draft | 4.47 | 58.7 | 126,005 | 75 | Â | Â |
CN17A0103 | China | Human feces | Draft | 4.43 | 58.8 | 110,083 | 102 | Â | Â |
CN17A0114 | China | Human feces | Draft | 4.43 | 58.9 | 237,189 | 35 | Â | Â |
CN17A0120 | China | Human feces | Draft | 4.52 | 58.6 | 82,803 | 128 | Â | Â |
CN17A0122 | China | Human feces | Draft | 4.48 | 58.7 | 196,730 | 33 | Â | Â |
CN17A0154 | China | Human feces | Draft | 4.44 | 59.0 | 260,206 | 33 | Â | Â |
ADV102 | France | Human feces | Draft | 4.52 | 58.6 | 108,450 | 87 | Â | [19] |
AMC34 | USA | Human intestinal tract | Draft | 4.58 | 58.4 | 219,183 | 1 | Â | Â |
MGYG-HGUT-02529 | China | Human gut | Draft | 4.70 | 58.4 | 119,499 | 124 | Â | Â |
ZJ12-3 | China | Human rectal swab | Draft | 4.70 | 58.4 | 119,499 | 124 | Â | Â |
AVNIH1 (GCA_001634325) | USA | Human perirectal swab | Complete | 4.96 | 58.5 | N/A | 2 | 1 | [20] |
AVNIH2 | USA | Human perirectal swab | Draft | 4.52 | 58.9 | 211,774 | 50 | Â | [20] |
1708–29,120 | China | Human cholangiolithiasis bile | Complete | 4.50 | 58.9 | N/A | 1 |  |  |
C198 | Thailand | Human blood, septicaemia | Draft | 4.58 | 58.6 | 4,550,752 | 3 | Â | Â |
FDAARGOS_632 | USA | Human | Complete | 4.56 | 58.9 | N/A | 2 | 1 | Â |
CECT 4257 | USA | Human sputum | Draft | 4.52 | 58.9 | 148,348 | 52 | Â | [21] |
AER39 | USA | Human blood | Draft | 4.42 | 58.8 | 188,051 | 4 | Â | [21] |
AER397 | USA | Human blood | Draft | 4.50 | 58.8 | 645,709 | 5 | Â | [21] |
BVH37 | France | Human blood | Draft | 4.46 | 58.8 | 115,181 | 55 | Â | [19] |
BVH46 | France | Human blood | Draft | 4.51 | 58.8 | 215,038 | 39 | Â | [22] |
BVH47 | France | Human blood | Draft | 4.64 | 58.9 | 96,732 | 108 | Â | [19] |
AK247 | France | Human forehead abscess | Draft | 4.55 | 58.8 | 260,691 | 36 | Â | [19] |
AMC35 | USA | Human wound | Draft | 4.57 | 58.5 | 351,392 | 2 | Â | [21] |
CCM 4359 | USA | Human sputum, drowning | Draft | 4.51 | 58.9 | 245,067 | 56 | Â | Â |
TTU2014-108AME | USA | Dairy cattle feces | Draft | 4.53 | 58.7 | 162,342 | 62 | Â | [17] |
TTU2014-108ASC | USA | Dairy cattle feces | Draft | 4.53 | 58.7 | 187,473 | 58 | Â | [17] |
TTU2014-113AME | USA | Dairy cattle feces | Draft | 4.66 | 58.6 | 74,547 | 122 | Â | [17] |
TTU2014-115AME | USA | Dairy cattle feces | Draft | 4.53 | 58.7 | 205,013 | 53 | Â | [17] |
TTU2014-115ASC | USA | Dairy cattle feces | Draft | 4.53 | 58.7 | 233,487 | 52 | Â | [17] |
TTU2014-125ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 168,256 | 58 | Â | [17] |
TTU2014-130AME | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 189,668 | 64 | Â | [17] |
TTU2014-130ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 247,513 | 49 | Â | [17] |
TTU2014-131ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 187,444 | 70 | Â | [17] |
TTU2014-134AME | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 204,478 | 50 | Â | [17] |
TTU2014-134ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 193,661 | 59 | Â | [17] |
TTU2014-140ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 148,012 | 81 | Â | [17] |
TTU2014-141AME | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 223,907 | 48 | Â | [17] |
TTU2014-141ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 241,272 | 45 | Â | [17] |
TTU2014-142ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 247,560 | 45 | Â | [17] |
TTU2014-143AME | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 204,478 | 59 | Â | [17] |
TTU2014-143ASC | USA | Dairy cattle feces | Draft | 4.68 | 58.6 | 202,296 | 54 | Â | [17] |
A31 | South Africa | Pig rectal swab | Draft | 4.64 | 58.5 | 114,767 | 84 | Â | Â |
A5 | South Africa | Pig rectal swab | Draft | 4.77 | 58.2 | 230,041 | 33 | Â | Â |
A86 | South Africa | Pig rectal swab | Draft | 4.64 | 58.5 | 206,004 | 42 | Â | Â |
A34 | South Africa | Pig rectal swab | Draft | 4.64 | 58.5 | 139,859 | 82 | Â | Â |
A136 | South Africa | Pig rectal swab | Draft | 4.67 | 58.4 | 213,730 | 41 | Â | Â |
Ae52 | Sri Lanka | Carassius auratus | Draft | 4.56 | 58.7 | 158,595 | 80 | Â | Â |
CL8155 | China | Carp gut, healthy | Draft | 4.68 | 58.6 | 284,020 | 50 | Â | Â |
JC529 | China | Carp sepsis | Complete | 4.83 | 58.3 | N/A | 1 | Â | Â |
MS 17–88 | USA | Catfish | Draft | 5.18 | 58.2 | 1,334,815 | 13 |  |  |
MS-18–37 | USA | Catfish | Complete | 4.68 | 58.6 | N/A | 1 |  |  |
ML09-123 | USA | Catfish | Draft | 4.75 | 58.4 | 299,782 | 32 | Â | Â |
VCK_1 | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.63 | 58.6 | 68,239 | 120 | Â | Â |
PDB | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.72 | 58.5 | 72,590 | 141 | Â | Â |
AG_5.28.6 | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.61 | 58.6 | 85,872 | 98 | Â | Â |
NS | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.71 | 58.5 | 67,042 | 140 | Â | Â |
NS2 | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.72 | 58.5 | 69,902 | 143 | Â | Â |
NS_6.15.2 | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.72 | 58.5 | 66,300 | 149 | Â | Â |
NS22 | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.74 | 58.4 | 61,224 | 172 | Â | Â |
NS13 | Greece | Dicentrarchus labrax kidney, diseased | Draft | 4.67 | 58.6 | 72,418 | 139 | Â | Â |
BIOO50A | Turkey | Dicentrarchus labrax kidney, diseased | Draft | 4.61 | 58.6 | 73,700 | 109 | Â | Â |
17ISAe | South Korea | Discus spleen | Complete | 4.66 | 58.5 | N/A | 2 | 1 | Â |
A8-AHP | India | Labeo rohita, diseased | Complete | 4.77 | 58.4 | N/A | 4 | 3 | Â |
UBA1835 | Spain | Anguilla anguilla epidermal mucus | Draft | 4.11 | 59.0 | 17,609 | 323 | Â | Â |
ZfB1 | China | Fish | Complete | 4.71 | 58.5 | N/A | 1 | Â | Â |
PhIn2 | India | Fish intestinal | Draft | 4.30 | 58.8 | 3789 | 1899 | Â | [21] |
CB51 | China | Grass carp | Complete | 4.58 | 58.6 | N/A | 1 | Â | [17] |
XH.VA.1 | China | Ictalurus punctatus | Draft | 5.36 | 56.5 | 259,638 | 62 | Â | Â |
XH.VA.2 | China | Ictalurus punctatus | Draft | 4.91 | 58.1 | 259,509 | 48 | Â | Â |
X11 | China | Megalobrama amblycephala | Complete | 4.28 | 58.8 | N/A | 1 | Â | Â |
X12 | China | Megalobrama amblycephala | Complete | 4.77 | 58.3 | N/A | 1 | Â | Â |
Aer_WatCTCBM21 | Brazil | Oreochromis niloticus | Draft | 4.60 | 58.7 | 317,324 | 45 | Â | Â |
CNRT12 | Thailand | Oreochromis sp. | Draft | 4.90 | 58.1 | 265,081 | 479 | Â | Â |
NK01 | Thailand | Oreochromis sp. | Draft | 4.56 | 58.5 | 171,547 | 95 | Â | Â |
NK02 | Thailand | Oreochromis sp. | Draft | 4.80 | 58.2 | 110,255 | 400 | Â | Â |
NK07 | Thailand | Oreochromis sp. | Draft | 4.78 | 58.6 | 214,996 | 46 | Â | Â |
UDRT09 | Thailand | Oreochromis sp. | Draft | 4.61 | 58.5 | 169,295 | 186 | Â | Â |
BAQ071013-135 | USA | Perch head kidney | Draft | 4.62 | 58.9 | 167,400 | 50 | Â | Â |
B44 | Brazil | Pseudoplatystoma corruscans kidney | Draft | 4.61 | 58.6 | 290,712 | 51 | Â | Â |
B48 | Brazil | Pseudoplatystoma corruscans kidney | Draft | 4.73 | 58.7 | 284,404 | 49 | Â | Â |
WB12 | China | Carassius auratus intestine, sick | Draft | 4.52 | 58.8 | 282,522 | 40 | Â | Â |
AVNIH1 (GCA_009834065) | South Korea | Silurus asotus | Complete | 4.81 | 58.5 | N/A | 1 | Â | Â |
TH0426 | China | Tachysurus fulvidraco | Complete | 4.92 | 58.3 | N/A | 1 | Â | Â |
XU1 | Greece | Xiphophorus helleri kidney | Draft | 4.80 | 58.0 | 206,195 | 92 | Â | Â |
XhG1.2 | India | Xiphophorus hellerii | Draft | 4.57 | 58.7 | 305,294 | 34 | Â | Â |
HX3 | China | Alligator | Complete | 4.76 | 58.5 | N/A | 2 | 1 | Â |
CQ-AV1 | China | Andrias davidianus liver | Draft | 4.78 | 58.5 | 204,972 | 36 | Â | Â |
161 | China | Channa argus | Draft | 4.51 | 58.7 | 312,206 | 28 | Â | Â |
LMG 13,067 | USA | Frog | Draft | 4.74 | 58.4 | 91,946 | 72 | Â | [21] |
S00030 | USA | Heterelmis comalensis | Draft | 4.51 | 58.7 | 237,167 | 21 | Â | Â |
Hm21 | Turkey | Hirudo verbena digestive tract | Complete | 4.77 | 58.7 | N/A | 2 | 1 | [21] |
CMF | India | Insect gut | Draft | 4.56 | 58.7 | 40,276 | 200 | Â | Â |
CIP 107,763 | India | Mosquito gut | Draft | 4.43 | 58.8 | 188,049 | 64 | Â | [21] |
AK241 | France | Snail | Draft | 4.60 | 58.6 | 215,278 | 42 | Â | [19] |
B565 | China | Aquaculture pond sediment | Complete | 4.55 | 58.7 | N/A | 1 | Â | [18] |
22 | Brazil | Combined sewer | Draft | 5.09 | 58.3 | 66,851 | 185 | Â | Â |
28 | Brazil | Combined sewer | Draft | 4.97 | 58.5 | 94,322 | 108 | Â | Â |
CECT 7059 | Spain | Drinking water | Draft | 4.81 | 58.4 | 188,889 | 31 | Â | Â |
RU31B | USA | Duckweeds | Draft | 4.53 | 58.7 | 73,776 | 93 | Â | Â |
CECT 4902 | Germany | Environment | Draft | 4.64 | 58.4 | 347,677 | 29 | Â | [19] |
AK236 | France | Lake water | Draft | 4.41 | 58.8 | 412,126 | 26 | Â | Â |
Colony604 | Thailand | Food | Draft | 4.57 | 57.8 | 7493 | 1 | Â | Â |
Colony111 | Thailand | Food | Draft | 4.58 | 57.8 | 7510 | 1 | Â | Â |
Colony512 | Thailand | Food | Draft | 4.60 | 58.5 | 16,905 | 1 | Â | Â |
Colony125 | Thailand | Food | Draft | 4.58 | 58.0 | 7702 | 1 | Â | Â |
pamvotica | Greece | Lake Pamvotis surface sentiment | Draft | 4.92 | 58.1 | 739,151 | 21 | Â | Â |
A134 | Israel | Lake Kinneret microcystis bloom | Draft | 4.41 | 58.7 | 50,812 | 151 | Â | Â |
S50-1 | USA | Organic kale | Draft | 4.56 | 58.5 | 104,479 | 130 | Â | Â |
CTe-01 | Peru | Oxidation pond | Draft | 4.68 | 58.6 | 111,555 | 200 | Â | Â |
ARB3 | Japan | Pond water | Draft | 4.54 | 58.8 | 205,115 | 63 | Â | [21] |
Z2-7 | China | Pork | Draft | 4.41 | 58.7 | 265,145 | 48 | Â | Â |
KLG7 | UK | River Don | Draft | 4.55 | 58.8 | 139,212 | 104 | Â | Â |
KLG5 | UK | River Don | Draft | 4.74 | 58.5 | 280,270 | 103 | Â | Â |
KLG8 | UK | River Don | Draft | 4.59 | 58.6 | 198,583 | 76 | Â | Â |
KLG9 | UK | River Don | Draft | 4.61 | 58.7 | 180,084 | 74 | Â | Â |
CECT 4486 | Germany | Surface water | Draft | 4.41 | 58.9 | 90,706 | 66 | Â | [21] |
CCM 7244 | Germany | Surface water | Draft | 4.42 | 58.9 | 185,495 | 74 | Â | [17] |
A29 | South Africa | Surface water | Draft | 4.48 | 58.8 | 165,894 | 54 | Â | Â |
AK227 | France | Wastewater treatment plant | Draft | 4.40 | 58.7 | 105,208 | 67 | Â | Â |
WP2-S18-CRE-03 | Japan | Wastewater treatment plant | Complete | 4.94 | 58.6 | N/A | 4 | 3 | Â |
WP3-W19-ESBL-03 | Japan | Wastewater treatment plant | Complete | 4.98 | 58.7 | N/A | 6 | 4 | Â |
WP8-S18-ESBL-11 | Japan | Wastewater treatment plant | Complete | 4.91 | 58.7 | N/A | 4 | 3 | Â |
WP8-W19-CRE-03 | Japan | Wastewater treatment plant | Complete | 4.79 | 58.5 | N/A | 6 | 4 | Â |
WP9-W18-ESBL-04 | Japan | Wastewater treatment plant | Complete | 4.93 | 58.7 | N/A | 5 | 4 | Â |
D | South Africa | Water | Draft | 4.43 | 59.0 | 54,053 | 149 | Â | Â |