Table 2 Gene Ontology terms identified as enriched by Fisher's exact test among SRDEOs
GO | Category | Term | FDR | Nº of genes |
|---|---|---|---|---|
GO:0009507 | CC | chloroplast | 1.51E-13 | 92 |
GO:0006355 | BP | regulation of transcription, DNA-templated | 2.76E-08 | 39 |
GO:0007623 | BP | circadian rhythm | 5.32E-08 | 12 |
GO:0010114 | BP | response to red light | 2.69E-07 | 9 |
GO:0005515 | MF | protein binding | 1.48E-06 | 60 |
GO:0003700 | MF | DNA-binding transcription factor activity | 6.36E-06 | 36 |
GO:0009649 | BP | entrainment of circadian clock | 1.64E-05 | 5 |
GO:0010017 | BP | red or far-red light signaling pathway | 1.64E-05 | 6 |
GO:0009535 | CC | chloroplast thylakoid membrane | 2.62E-05 | 14 |
GO:0009570 | CC | chloroplast stroma | 3.02E-05 | 19 |
GO:0009637 | BP | response to blue light | 0.00026005 | 6 |
GO:0080167 | BP | response to karrikin | 0.00036018 | 8 |
GO:0009416 | BP | response to light stimulus | 0.00053656 | 10 |
GO:0009658 | BP | chloroplast organization | 0.00135533 | 8 |
GO:0090351 | BP | seedling development | 0.00239464 | 4 |
GO:0000427 | CC | plastid-encoded plastid RNA polymerase complex | 0.00340051 | 3 |
GO:0032922 | BP | circadian regulation of gene expression | 0.00340051 | 3 |
GO:0042752 | BP | regulation of circadian rhythm | 0.00563682 | 4 |
GO:0042753 | BP | positive regulation of circadian rhythm | 0.006172 | 3 |
GO:0010218 | BP | response to far red light | 0.01466872 | 4 |
GO:0045892 | BP | negative regulation of transcription, DNA-templated | 0.01476035 | 7 |
GO:0009909 | BP | regulation of flower development | 0.01476035 | 5 |
GO:0009579 | CC | thylakoid | 0.02513588 | 7 |
GO:0009654 | CC | photosystem II oxygen evolving complex | 0.02601454 | 3 |
GO:0009534 | CC | chloroplast thylakoid | 0.03019725 | 7 |
GO:2000028 | BP | regulation of photoperiodism, flowering | 0.04020657 | 3 |