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Table 1 Summary statistic for the Paspalum notatum ‘Flugge’ genome

From: High-quality chromosome-scale de novo assembly of the Paspalum notatum ‘Flugge’ genome

 

Assembly

Genome assembly

Estimated genome size

549 M

Total length of assembly

541 M

Number of contigs

79

Contig N50

52Mbp

Largest contig

126Mbp

Number of scaffolds

49

Scaffold N50

49Mbp

Chromosome coverage(%)

95.15%

GC content of genome

45.65%

 

Annotation

Total length

Transposable elements

Total

328Mbp(60.64%)

Retrotransposon

263Mbp(49.38%)

DNA Transposon

20Mbp (3.71%)

 

Copies

Noncoding RNAs

rRNAs

828

tRNAs

846

miRNAs

133

snRNAs

1708

Gene models

Number of genes

36,511

Mean gene length

4029 bp

Mean coding sequence length

1503 bp