Fig. 2

Visualization of Mauve alignments of the subset of recently sequenced closed chromosomes by clade membership. Changes in color within a panel indicate rearrangement of the chromosomes while lines within one color indicate differences of one chromosome from the others in the clade. Colored pieces of the chromosomes descending below the top line (such as the yellow piece in clade 1 FLT_2007G) indicted an inversion of that section of the chromosome in relation to others in the clade