Fig. 3From: Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detectionFocus of large structural variations (MU) located in complex locations. For each location, optical maps are colored in green for the Col-0 TAIR10.1 reference maps (ChrM for mitochondrial chromosome map) and light blue for Evry.Ler-1 maps. Consistent DLE-1 enzyme label between reference and Evry.Ler-1 maps are represented by dark blue bars with grey links between the genome maps. Inconsistent DLE-1 enzyme label are shown by yellow bars on the two genome maps. The purple bars represent the insertion events on the Evry.Ler-1 maps / read / assembly, and the black, yellow and pink bars correspond to deletions, inversions and translocations respectively. Araport11 annotation of the Col-0 TAIR10.1 reference (Genes and TE) and IGV view of the Evry.Ler-1 trimmed ONT reads and SMARTdenovo contigs minimap alignments are also presented. A Bionano Chr2 Evry.Ler-1 translocations against Col-0 TAIR10.1 reference genome (MU_153). B Bionano Chr4 Evry.Ler-1 extra-range size inversion against Col-0 TAIR10.1 reference genome (MU_097). C Bionano Chr4 Evry.Ler-1 large deletion against Col-0 TAIR10.1 reference genome (MU_102). D Bionano Chr5 Evry.Ler-1 inversion against Col-0 TAIR10.1 reference genome (MU_138)Back to article page