Skip to main content
Fig. 5 | BMC Genomics

Fig. 5

From: FindIT2: an R/Bioconductor package to identify influential transcription factor and targets based on multi-omics data

Fig. 5

The findIT_regionRP function provides detailed information in multi-dimension. A The TF ranking result produced from findIT_regionRP. The ATAC-seq dataset at E5 0 h was used. The Y-axis represents the -log10(p-value), while the x-axis represents the rank order of all TFs. B The ATAC-seq track of AT2G8610. The genomic region is shown and selected gene is highlighted in black. The locations of the ATAC-seq peaks are indicated by purple rectangles. The peaks hit by LEC2 are shadowed. C The interface of shinyParse_findIT_regionRP

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us