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Table 2 The results of KEGG pathway analysis of 248 DEGs that fulfilled the selection criteria of |log2FC|≥ 2 and adjusted P-value < 0.001

From: Identification and functional validation of HLA-C as a potential gene involved in colorectal cancer in the Korean population

Group

KEGG pathway term

P-value

Genes

Up-regulated genes

nd

nd

nd

Down-regulated genes

Cytokine-cytokine receptor interaction

3.80E-06

BMP2, CCL11, CCL5, CSF2, INHBB, IL11, IL2RG, IL20RB, IL23A, IL7R, LTA, LTB, TNFSF15, TNFRSF4, TNFRSF9

Hematopoietic cell lineage

4.60E-03

CSF2, ITGAM, IL11, IL7R, HLA-DRA, HLA-DRB1

Asthma

5.70E-03

CCL11, HLA-DOA, HLA-DRA, HLA-DRB1

Pathways in cancer

8.10E-03

CBLC, BIRC3, BMP2, FGF21, KLK3, LAMB3, LAMC2, MMP9, SHH, WNT7B, WNT9A

Jak-STAT signaling pathway

1.40E-02

CBLC, CSF2, IL11, IL2RG, IL20RB, IL23A, IL7R

Type I diabetes mellitus

1.60E-02

LTA, HLA-DOA, HLA-DRA, HLA-DRB1

ErbB signaling pathway

2.50E-02

CBLC, SHC2, AREG, EREG, HBEGF

Basal cell carcinoma

3.30E-02

BMP2, SHH, WNT7B, WNT9A

Hedgehog signaling pathway

3.40E-02

BMP2, SHH, WNT7B, WNT9A

  1. Functional annotation is based on KEGG pathway analysis implemented in DAVID 6.7. Abbreviations are as follows: BP biological process, nd not detected