Skip to main content

Table 1 The counting table of human genes and enhancer having enhancers having enhancer-AS association for different AS types. The row “All” represents the number of genes or enhancers having associations in any types of AS. The column “input” means the number of genes or enhancers which are qualified for the analysis. The column “significant” represents the number of genes or enhancers pass the q-value smaller than 0.05

From: Genome-wide identification of associations between enhancer and alternative splicing in human and mouse

AS type

 

Counting by genes

 

Counting by enhancers

 

Significant

Input

Percentage

 

Significant

Input

Percentage

A5SS

 

310

732

42.35%

 

800

4542

17.61%

A3SS

 

327

724

45.17%

 

911

4727

19.27%

SE

 

367

1406

26.10%

 

807

8610

9.37%

RI

 

579

977

59.26%

 

1882

6896

27.29%

MSE

 

276

629

43.88%

 

826

4267

19.36%

MXE

 

209

309

67.64%

 

727

1757

41.38%

AFE

 

1578

2121

74.40%

 

6545

15,695

41.70%

ALE

 

860

1858

46.29%

 

2466

13,137

18.77%

ATSS

 

2441

3548

68.80%

 

7660

25,654

29.86%

ATTS

 

1890

4011

47.12%

 

4861

29,766

16.33%

All

 

3242

4658

69.60%

 

11,262

35,158

32.03%