From: PhyloMissForest: a random forest framework to construct phylogenetic trees with missing data
Dataset | %Missing | Non-bootstrap p-values | Bootstrap p-values | PhyloMissForest diff. | |||
---|---|---|---|---|---|---|---|
Vs. AE | Vs. MF | Vs. AE | Vs. MF | Vs. AE | Vs. MF | ||
9x9 | 5% | 0.09 | 0.25 | 0.02 | 0.10 | \(\checkmark \) | \(\checkmark \) |
10% | 0.00 | 0.02 | 0.00 | 0.01 | \(\checkmark \) | \(\checkmark \) | |
15% | 0.02 | 0.08 | 0.01 | 0.09 | \(\checkmark \) | \(\checkmark \) | |
20% | 0.02 | 0.02 | 0.11 | 0.14 | \(\checkmark \) | \(\checkmark \) | |
25% | 0.25 | 0.28 | 0.22 | 0.12 | × | × | |
30% | 0.00 | 0.14 | 0.00 | 0.12 | \(\checkmark \) | × | |
35% | 0.58 | 0.17 | 0.97 | 0.44 | × | × | |
40% | 0.09 | 0.31 | 0.19 | 0.35 | \(\checkmark \) | × | |
45% | 0.31 | 0.44 | 0.06 | 0.10 | \(\checkmark \) | \(\checkmark \) | |
50% | 0.14 | 0.17 | 0.09 | 0.53 | \(\checkmark \) | × | |
55% | 0.11 | 0.44 | 0.01 | 0.09 | \(\checkmark \) | \(\checkmark \) | |
60% | 0.01 | 0.91 | 0.00 | 0.35 | \(\checkmark \) | × |