Table 1 The numbers of all reads obtained from sequencing and number of mapped and unmapped reads to reference sequence for each E. coli genome
Genome id | Total number of reads | Number of reads mapped to reference sequence | Number of unmapped reads |
|---|---|---|---|
EC155 | 4031662 | 2953193 (73.25%) | 801054 (19.87%) |
EC156 | 3544566 | 2367147 (66.78%) | 906120 (25.56%) |
EC157 | 3333908 | 2264411 (67.92%) | 751002 (22.53%) |
EC158 | 3984774 | 2983151 (74.86%) | 683866 (17.16%) |
EC159 | 3776174 | 2853515 (75.57%) | 632261 (16.74%) |
EC160 | 3112904 | 2351050 (75.53%) | 593368 (19.06%) |
EC161 | 3267268 | 2302509 (70.47%) | 735359 (22.51%) |
EC162 | 3572526 | 2300743 (64.40%) | 915207 (25.62%) |
EC163 | 3626826 | 2706501 (74.62%) | 674798 (18.61%) |
EC164 | 3332504 | 2221564 (66.66%) | 840645 (25.23%) |
EC165 | 3184082 | 2295010 (72.08%) | 470745 (14.78%) |
EC166 | 3070262 | 2057830 (67.02%) | 807256 (26.29%) |
EC167 | 5137462 | 3771148 (73.40%) | 1062188 (20.68%) |
EC168 | 3020940 | 2084303 (69.00%) | 744089 (24.63%) |
EC169 | 3277332 | 2277124 (69.48%) | 767589 (23.42%) |
EC170 | 3104926 | 2160099 (69.57%) | 733623 (23.63%) |
EC171 | 3122874 | 2536284 (81.22%) | 400601 (12.83%) |
EC172 | 2514472 | 2018011 (80.26%) | 364826 (14.51%) |
EC173 | 2930570 | 2326282 (79.38%) | 409058 (13.96%) |
EC174 | 2625002 | 2082053 (79.32%) | 348544 (13.28%) |
EC1773 | 2953930 | 2362794 (79.99%) | 413730 (14.01%) |