Table 7 Epistatic analysis between quantitative traits loci in the Agili39/Khiar bi-parental mapping population using the inclusive composite interval mapping of digenic epistatic QTL (ICIM-EPI) method in QTL the IciMapping software
Isolate-Trait-Physiological Stage | Chromosome1 a | QTL ID | Position 1 (cM) b | Flanking markers (Position 1) | Chromosome 2 c | QTL ID | Position 2 (cM) d | Flanking markers (Position 2) | LODe | PVE (%)f | Add1 g | Add2 h | AddbyAddi |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
IPO95052-Pycnidia-Seedling | 1A | Qstb1A | 60 | Tag_1123459—Tag_1694925 | 5B | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 19.1 | 0.9 | 74.7 | 70.5 | 76.6 |
IIB123-Pycnidia-Seedling | 7As | Qstb7A | 55 | Tag_2277193Tag_100009953 | 5B | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 12.9 | 2.0 | 56.4 | 49.8 | 62.9 |
IIB123-Pycnidia-Adult (F9:10) | Qstb7A | 75 | Tag_4411932—Tag_4005129 | Qstb5B | 65 | Tag_1125523—Tag_4909926 | 9.0 | 1.9 | -0.1 | 0.0 | 0.8 | ||
IPO91009-Pycnidia-Seedling | Qstb7A | 55 | Tag_2277193—Tag_100009953 | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 19.5 | 1.1 | 59.4 | -59.0 | -56.8 | ||
IPO95052-Pycnidia-Seedling | Qstb7A | 80 | Tag_4411932—Tag_4005129 | Qstb5B | 50 | Tag_1125523—Tag_4909926 | 19.8 | 0.9 | 74.3 | 73.1 | 75.0 | ||
Tun6-Necrosis- Seedling | 2B | Qstb2B_1 | 75 | Tag_1056626—Tag_1117572 | 5B | Qstb5B | 60 | Tag_1125523—Tag_4909926 | 7.3 | 31.0 | 94.4 | -63.2 | -76.5 |
Tun6-Pycnidia-Seedling | Qstb2B_1 | 75 | Tag_1056626—Tag_1117572 | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 15.8 | 10.6 | 104.2 | -83.8 | -69.0 | ||
IPO91004-Pycnidia-Seedling | Qstb2B_1 | 70 | Tag_100012058—Tag_1056626 | Qstb5B | 45 | Tag_1125523—Tag_4909926 | 17.1 | 2.9 | 66.8 | 58.4 | 60.2 | ||
Tun6-Pycnidia-Adult (F5:6) | Qstb2B_2 | 115 | Tag_100031118—Tag_3027184 | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 6.8 | 54.6 | 1.9 | -0.4 | -0.4 | ||
IIB123-Pycnidia-Seedling | Qstb2B_2 | 115 | Tag_100031118—Tag_3027184 | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 15.2 | 1.8 | 26.8 | 54.4 | 57.3 | ||
IPO91009-Pycnidia-Seedling | Qstb2B_2 | 120 | Tag_100031118 -Tag_3027184 | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 23.0 | 1.1 | 56.5 | -57.7 | -60.0 | ||
IPO95052-Pycnidia-Seedling | Qstb2B_2 | 100 | Tag_1077600—Tag_100008169 | Qstb5B | 55 | Tag_1125523—Tag_4909926 | 29.1 | 1.0 | 49.6 | 78.7 | 79.7 |