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Table 4 Gene Expression Patterns of Selected Genes

From: Identification of condition-specific regulatory mechanisms in normal and cancerous human lung tissue

Genes

Condition

log2Fold

*p-value

DEG

Up in LUAD/LUSC

ETV1

LUAD

0.59

2.82E-15

Y

N

ETV4

LUAD

−3.71

0.00E+ 00

Y

Y

ETV6

LUAD

0.17

1.26E-04

Y

N

ELK4

LUAD

0.39

1.20E-25

Y

N

LIMS2

LUAD

3.66

0.00E+ 00

Y

N

ILVBL

LUAD

−0.28

1.02E-11

Y

Y

ABCC5

LUAD

0.52

3.04E-19

Y

N

PSMA4

LUSC

−0.93

3.90E-181

Y

Y

PSMC5

LUSC

−0.38

1.28E-43

Y

Y

E2F1

LUSC

−1.81

2.47E-184

Y

Y

MCM5

LUSC

−1.82

0.00E+ 00

Y

Y

GINS1

LUSC

−4.35

0.00E+ 00

Y

Y

GINS2

LUSC

−4.03

0.00E+ 00

Y

Y

CDC45

LUSC

−4.10

0.00E+ 00

Y

Y

RFC4

LUSC

−2.92

0.00E+ 00

Y

Y

RFC5

LUSC

−1.92

0.00E+ 00

Y

Y

PRIM1

LUSC

−2.00

0.00E+ 00

Y

Y

PCNA

LUSC

−2.33

0.00E+ 00

Y

Y

SPC25

LUSC

−3.36

0.00E+ 00

Y

Y

SFTA3

LUSC

2.97

4.41E-87

Y

N

SFTPA2

LUSC

2.25

2.01E-38

Y

N

SFTPB

LUSC

2.64

2.43E-68

Y

N

SFTPD

LUSC

1.94

3.61E-41

Y

N

  1. LUAD lung adenocarcinoma, LUSC lung squamous cell carcinoma
  2. *Adjusted p values less than 1e-03 represents this gene was differentially expressed between GTEx normal and LUAD or LUSC