Fig. 3
From: Genome-wide association analysis reveals a novel QTL CsPC1 for pericarp color in cucumber
Fine mapping of CsPC1 on chromosome 3. a LOD (log 10 of the odds ratio) plots of linkage analysis based on SNP markers indicate the most likely position of CsPC1 between markers SNP39009359 and SNP39775194 on chromosome 3. b Mapping of the CsPC1 region using three recombinants with extremely light-green pericarp color identified from 278 plants in the F2 and one BC4F2 individual. CsPC1 was placed within a 94-kb interval containing 15 candidate genes between the markers SNP39531980 and SNP39626163. c Relative expression of three candidate genes in the fruit pericarp of the light-green near isogenic line NIL-1334 and the dark-green near isogenic line NIL-1325 at 0 days post-anthesis (DPA). The relative expression is shown as the mean ± standard deviation, and statistical significance was determined using Student’s t-tests (*P < 0.05)