Fig. 7
From: Characterising genome architectures using genome decomposition analysis
GDA analysis of Toxoplasma gondii highlights gene-poor subtelomeres and gene family-rich islands. A Using the seq + rep + gene + orth feature set, the T. gondii genome separated into 5 distinct clusters. B Cluster 1 (gold) was often found at the ends of chromosomes and was typified by low numbers of mRNA annotations, high GC skew, complex repeats and stop codon frequency (C). This is similar to what we see in E. tenella subtelomeres. In the heatmap colours indicate the relative value of the feature in each cluster (red = highest, blue lowest), icons indicate significance (‘∧’ = KS test greater p-value <  = 1e-20, ‘∨’ = KS test lesser p-value <  = 1e-20, ‘-’ = great and lesser p-values <  = 1e-20)