Transcriptome sequencing reveals the differentially expressed lncRNAs and mRNAs in response to cold acclimation and cold stress in Pomacea canaliculata

Table 1 Number of differential expression mRNA and lncRNA in experimental and control group of Pomacea canaliculata

Comparison groups	Ca0 vs Con0	Ca24 vs Con24	Con24 vs Con0	Ca24 vs Ca0
Up-regulated mRNA	1129	1328	33	18
Down-regulated mRNAs	1039	972	55	10
Up-regulated lncRNAs	57	60	14	18
Down-regulated lncRNAs	40	38	17	17
Co-expression target genes	637	875	169	135
Co-location target genes	1195	1085	455	439

Con0: 0 °C cold treatment of control group at 0 h; Con24: 0 °C cold treatment of control group at 24 h; Ca0: 0 °C cold treatment of experimental group at 0 h; Ca24: 0 °C cold treatment of control group at 24 h; Co-expression: the lncRNA function was predicted by mRNA genes associated with its expression; Co-location: the lncRNA function was predicted by mRNA genes associated with its location

ISSN: 1471-2164