Table 3 Summary of QTLs detected in GWAS and candidate genes associated with body reserves and body reserves dynamics
Traita | Chr | Nb SNPsb | Top SNPc | Position (bp) | -log10(P-value) | SNP effectd | Closest genee |
|---|---|---|---|---|---|---|---|
BCS-Pb | 1 | 3 | OAR1_40030112.1 | 38,809,812 | 6.55 | 3.7 | PGM1 |
BCS-L | 1 | 1 | OAR1_40030112.1 | 38,809,812 | 5.87 | 3.3 | PGM1 |
BCS-Pa | 1 | 2 | s30054.1 | 40,524,081 | 5.60 | 2.7 | DNAJC6 |
BCS-Sa | 1 | 3 | oar3_OAR1_40821987 | 40,821,987 | 6.06 | 2.8 | LEPR |
BCS-Pb | 1 | 7 | oar3_OAR1_40,857,869 | 40,857,869 | 6.90 | 3.5 | LEPR |
BCS-L | 1 | 11 | oar3_OAR1_40890859 | 40,890,859 | 7.44 | 3.9 | LEPR |
BCS-Pb | 1 | 2 | OAR1_42228129.1 | 42,228,129 | 6.03 | 2.9 | MIER1 |
BCS-Sb | 2 | 1 | OAR2_204233702.1 | 192,716,355 | 5.51 | 2.5 | MYO1B, STAT1 |
BCS-Pa:W | 3 | 1 | OAR3_115100887.1 | 115,100,887 | 5.24 | 2.4 | SYT1 |
BCS-Pb | 8 | 1 | s48527.1 | 13,120,875 | 4.84 | 2.0 | TPD52L1 |
BCS-Pa | 10 | 1 | OAR10_9706403.1 | 11,281,919 | 5.00 | 2.0 | PCDH8 |
BCS-Pa | 15 | 1 | OAR15_26097184.1 | 24,911,875 | 4.82 | 2.3 | NXPE4 |
BCS-Sa | 15 | 1 | OAR15_87285774.1 | 78,544,042 | 5.22 | 2.3 | OR10W1 |
BCS-Sa | 15 | 1 | OAR15_87912118.1 | 87,912,118 | 4.65 | 2.2 | – |
BCS-W:Wp | 16 | 2 | OAR16_33763548.1 | 31,368,878 | 6.59 | 2.6 | CCL28 |
BCS-W:Wp | 16 | 1 | OAR16_34857607.1 | 34,857,607 | 4.99 | 1.9 | DAB2 |
BCS-Pa:L | 16 | 1 | OAR16_46544413.1 | 42,819,279 | 5.03 | 2.0 | CDH6 |
BCS-Sa | 17 | 1 | s70069.1 | 14,052,727 | 4.47 | 2.3 | FREM3, GAB1 |
BCS-L | 18 | 1 | OAR18_31578626.1 | 30,304,217 | 4.65 | 2.4 | NRG4 |
BCS-M:Pa | 22 | 1 | OAR22_24239807.1 | 24,239,807 | 4.39 | 1.9 | SORCS3 |
BCS-Pa:L | 24 | 1 | OAR24_22245800.1 | 20,494,588 | 4.20 | 1.9 | HS3ST2 |
BCS-W:Wp | 25 | 1 | s68395.1 | 32,693,219 | 4.43 | 1.6 | KCNMA1 |
BCS-Pa | 25 | 1 | OAR25_39067458.1 | 37,133,591 | 4.75 | 2.5 | – |