Table 9 CPI prediction performance on DUD-E dataset
From: Sequence-based drug-target affinity prediction using weighted graph neural networks
Method | Protein rep. | Compound rep. | AUC | Precision | Recall |
|---|---|---|---|---|---|
WGNN-DTA (GCN) | GCN | GCN | 0.963 | 0.949 | 0.789 |
WGNN-DTA (GAT) | GAT | GAT | 0.962 | 0.896 | 0.867 |