Genomic analysis provides novel insights into diversification and taxonomy of Allorhizobium vitis (i.e. Agrobacterium vitis)

Table 1 Characteristics of 14 strains of the All. vitis species complex analyzed in this study and their genome sequence features

Strain	Species	Geographic origin	Year of isolation	Reference	Genome sequencing	Contigs (N)	N50 (Kb)	Size (Mb)	GC Content (%)	Gene^a	CDS^a	Accession number
K309^T	All. vitis sensu stricto	Australia	1977	[9]	(51)	22	999	5.75	57.55	5188	5136	LMVL00000000.2
IPV-BO 6186	All. vitis sensu stricto	Italy	2006	[29]	This study	79	608	5.80	57.57	5250	5196	VOLK00000000.1
IPV-BO 7105	All. vitis sensu stricto	Italy	2007	[28]	This study	91	462	5.81	57.54	5214	5157	VOLJ00000000.1
KFB 239	All. vitis sensu stricto	Serbia	2010	[30]	This study	82	456	6.15	57.57	5545	5490	VOLI00000000.1
KFB 253	All. vitis sensu stricto	Serbia	2011	[30]	This study	70	401	5.81	57.56	5290	5235	VOLF00000000.1
S4^T	All. ampelinum	Hungary	1981	[31]	(18)	CG^b	CG^b	6.32	57.47	5840	5770	CP000633.1-CP000639.1
IPV-BO 1861–5	All. ampelinum	Italy	1984	[32]	This study	110	971	5.67	57.63	5125	5072	VOLM00000000.1
IPV-BO 5159	All. ampelinum	Italy	2003	[32]	This study	160	269	6.47	57.56	5939	5883	VOLL00000000.1
KFB 243	All. ampelinum	Serbia	2011	[30]	This study	210	270	6.52	57.62	5963	5909	VOLH00000000.1
KFB 250	All. ampelinum	Serbia	2011	[30]	This study	135	356	6.47	57.60	5845	5790	VOLG00000000.1
KFB 254	All. ampelinum	Serbia	2011	[30]	This study	76	492	5.96	57.60	5433	5380	VOLE00000000.1
KFB 264	All. ampelinum	Serbia	2011	[30]	This study	75	714	5.92	57.52	5355	5299	VOLD00000000.1
V80/94	All. ampelinum	USA	1994	[33]	(92)	66	413	5.98	57.48	5467	5414	NBZE00000000.1
Av2	Allorhizobium sp.	Croatia	2006	[28]	This study	123	407	6.23	57.58	5713	5659	VOLN00000000.1

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