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Table 1 DEGs in C. ficifolia leaf after infection by FOC at 2 dpi and 4 dpi

From: Transcriptomic and proteomic analyses of Cucurbita ficifolia Bouché (Cucurbitaceae) response to Fusarium oxysporum f.sp. cucumerium

Gene ID 2d-VS-CK log2FC 4d-VS-CK log2FC Gene annotation
Ethylene
 CL780Contig2 -4.07 -1.78 Protein REVEILLE 7, response to ethylene
 comp69483_c1_seq15_1 -3.57 -3.06 Protein REVEILLE 7, response to ethylene
 CL4715Contig1 -1.89 -2.01 Protein REVEILLE 6, response to ethylene
 comp43670_c0_seq2_3 6.05 6.41 Protein REVEILLE 6, response to ethylene
 CL28656Contig1 2.42 2.76 Ethylene-responsive transcription factor ERF106
 CL42540Contig1 2.72 2.40 Ethylene-responsive transcription factor ERF106
 CL27086Contig1 3.08 3.28 Ethylene-responsive transcription factor ERF053
 CL21678Contig1 -2.90 -2.50 Ethylene-responsive transcription factor 4
 CL3070Contig1 2.13 2.95 1-aminocyclopropane-1-carboxylate oxidase homolog 3
Auxin
 CL30348Contig1 -2.21 -3.69 Auxin-responsive protein SAUR50
 CL1073Contig1 2.17 3.11 Auxin-repressed 12.5 kDa protein
 CL2472Contig1 2.28 3.19 Auxin-repressed 12.5 kDa protein
 CL24742Contig1 1.92 1.82 Auxin response factor 6
 comp51974_c0_seq1_1 2.08 2.02 Auxin response factor 6
 CL7285Contig1 2.02 2.64 IAA-amino acid hydrolase ILR1,auxin metabolic process
 CL24970Contig1 3.42 4.92 Glutathione S-transferase,auxin-activated signaling pathway
Abscisic acid
 CL10966Contig1 3.91 3.15 Protein MOTHER of FT and TFL1,response to abscisic acid
 CL24926Contig1 2.06 1.76 Abscisic acid receptor PYL4
Other hormones
 comp63305_c0_seq6_2 2.51 2.35 Protein NRT1/PTR FAMILY 6.2,response to jasmonic acid
 CL621Contig1 -2.39 -3.04 Cytokinin dehydrogenase 1
Transcription factor
 CL4801Contig1 2.46 2.57 Transcription factor SRM1
 comp63308_c1_seq4_1 1.88 2.22 Transcription factor SRM1
 CL2579Contig1 7.78 7.76 Transcription factor PCL1
 CL24093Contig1 -2.25 -3.34 Transcription factor MYB1R1
 CL26072Contig1 4.77 5.46 Transcription factor LUX
 CL37562Contig1 6.00 6.98 Transcription factor LUX
 comp62782_c2_seq8_2 -1.83 -1.57 Transcription factor ILR3
 CL1Contig37 -5.03 -5.08 Transcription factor HY5
 comp75510_c0_seq1_2 2.14 2.00 Transcription factor BOA
 CL51358Contig1 -2.70 -2.82 Transcription factor bHLH66
 CL19223Contig1 -2.42 -1.96 Transcription activator GLK1
 CL1942Contig2 -2.21 -1.89 Transcription activator GLK1
Resistance-related genes
 CL25265Contig1 3.62 4.36 Universal stress protein A-like protein
 CL478Contig1 3.32 4.82 Isochorismate synthase, chloroplastic
 comp67592_c0_seq158_1 2.47 1.95 Isochorismate synthase, chloroplastic
 CL29528Contig1 3.87 4.57 Protein ENHANCED DISEASE RESISTANCE 4
 CL601Contig2 1.95 2.15 Wound-induced protein 1
Photosynthesis
 CL5872Contig1 -2.77 -2.97 Photosystem II 22 kDa protein, chloroplastic
 CL8698Contig1 -2.29 -2.76 Photosystem II 22 kDa protein, chloroplastic
 CL50394Contig1 -1.81 -1.77 Magnesium-protoporphyrin IX monomethyl ester cyclase
 CL4989Contig1 -2.15 -3.37 Magnesium-chelatase subunit ChlH, chloroplastic
 CL25245Contig1 -1.73 -2.31 Chlorophyll a-b binding protein 13, chloroplastic