Table 1 DEGs in C. ficifolia leaf after infection by FOC at 2 dpi and 4 dpi

Ethylene

 CL780Contig2

-4.07

-1.78

Protein REVEILLE 7, response to ethylene

 comp69483_c1_seq15_1

-3.57

-3.06

Protein REVEILLE 7, response to ethylene

 CL4715Contig1

-1.89

-2.01

Protein REVEILLE 6, response to ethylene

 comp43670_c0_seq2_3

6.05

6.41

Protein REVEILLE 6, response to ethylene

 CL28656Contig1

2.42

2.76

Ethylene-responsive transcription factor ERF106

 CL42540Contig1

2.72

2.40

Ethylene-responsive transcription factor ERF106

 CL27086Contig1

3.08

3.28

Ethylene-responsive transcription factor ERF053

 CL21678Contig1

-2.90

-2.50

Ethylene-responsive transcription factor 4

 CL3070Contig1

2.13

2.95

1-aminocyclopropane-1-carboxylate oxidase homolog 3

Auxin

 CL30348Contig1

-2.21

-3.69

Auxin-responsive protein SAUR50

 CL1073Contig1

2.17

3.11

Auxin-repressed 12.5 kDa protein

 CL2472Contig1

2.28

3.19

Auxin-repressed 12.5 kDa protein

 CL24742Contig1

1.92

1.82

Auxin response factor 6

 comp51974_c0_seq1_1

2.08

2.02

Auxin response factor 6

 CL7285Contig1

2.02

2.64

IAA-amino acid hydrolase ILR1,auxin metabolic process

 CL24970Contig1

3.42

4.92

Glutathione S-transferase,auxin-activated signaling pathway

Abscisic acid

 CL10966Contig1

3.91

3.15

Protein MOTHER of FT and TFL1,response to abscisic acid

 CL24926Contig1

2.06

1.76

Abscisic acid receptor PYL4

Other hormones

 comp63305_c0_seq6_2

2.51

2.35

Protein NRT1/PTR FAMILY 6.2,response to jasmonic acid

 CL621Contig1

-2.39

-3.04

Cytokinin dehydrogenase 1

Transcription factor

 CL4801Contig1

2.46

2.57

Transcription factor SRM1

 comp63308_c1_seq4_1

1.88

2.22

Transcription factor SRM1

 CL2579Contig1

7.78

7.76

Transcription factor PCL1

 CL24093Contig1

-2.25

-3.34

Transcription factor MYB1R1

 CL26072Contig1

4.77

5.46

Transcription factor LUX

 CL37562Contig1

6.00

6.98

Transcription factor LUX

 comp62782_c2_seq8_2

-1.83

-1.57

Transcription factor ILR3

 CL1Contig37

-5.03

-5.08

Transcription factor HY5

 comp75510_c0_seq1_2

2.14

2.00

Transcription factor BOA

 CL51358Contig1

-2.70

-2.82

Transcription factor bHLH66

 CL19223Contig1

-2.42

-1.96

Transcription activator GLK1

 CL1942Contig2

-2.21

-1.89

Transcription activator GLK1

Resistance-related genes

 CL25265Contig1

3.62

4.36

Universal stress protein A-like protein

 CL478Contig1

3.32

4.82

Isochorismate synthase, chloroplastic

 comp67592_c0_seq158_1

2.47

1.95

Isochorismate synthase, chloroplastic

 CL29528Contig1

3.87

4.57

Protein ENHANCED DISEASE RESISTANCE 4

 CL601Contig2

1.95

2.15

Wound-induced protein 1

Photosynthesis

 CL5872Contig1

-2.77

-2.97

Photosystem II 22 kDa protein, chloroplastic

 CL8698Contig1

-2.29

-2.76

Photosystem II 22 kDa protein, chloroplastic

 CL50394Contig1

-1.81

-1.77

Magnesium-protoporphyrin IX monomethyl ester cyclase

 CL4989Contig1

-2.15

-3.37

Magnesium-chelatase subunit ChlH, chloroplastic

 CL25245Contig1

-1.73

-2.31

Chlorophyll a-b binding protein 13, chloroplastic