Skip to main content

Table 2 DEGs in C. ficifolia leaf after infection by FOC only at 4 dpi

From: Transcriptomic and proteomic analyses of Cucurbita ficifolia Bouché (Cucurbitaceae) response to Fusarium oxysporum f.sp. cucumerium

Gene ID 4d-VS-CK log2FC Gene annotation
Ethylene
 CL12896Contig1 3.92 Ethylene-responsive proteinase inhibitor 1
 comp51941_c0_seq1_3 -1.50 Ethylene receptor 2
 CL23139Contig1 1.94 1-aminocyclopropane-1-carboxylate oxidase 5
Jasmonic acid
 CL19963Contig1 2.59 3-ketoacyl-CoA thiolase 2, peroxisomal
 CL21247Contig1 2.56 3-ketoacyl-CoA thiolase 2, peroxisomal
ABA
 comp51694_c0_seq3_2 2.01 ABSCISIC ACID-INSENSITIVE 5-like protein 6
 CL23454Contig1 2.10 Abscisic acid receptor PYL8
 CL23796Contig1 -1.81 Abscisic acid receptor PYL4
Auxin
 CL46582Contig1 -1.51 Auxin-induced protein 22D
 CL38635Contig1 2.05 Auxin transport protein BIG
 CL28225Contig1 -4.01 Auxin efflux carrier component 5
Other hormones
 CL25910Contig1 1.92 Gibberellin 20 oxidase 1
 CL14729Contig1 -1.40 Protein EXORDIUM, response to brassinosteroid
 CL30190Contig1 -1.41 Salicylic acid-binding protein 2
Resistance-related
 CL5641Contig1 3.37 Adrenodoxin-like protein 2, mitochondrial
 CL28332Contig1 -2.41 Peroxidase 47
 CL304Contig1 -1.89 Peroxidase 39
 CL52011Contig1 3.12 Disease resistance protein RPS6
 CL33669Contig1 1.36 MLO-like protein 6
 CL4874Contig1 1.25 MLO-like protein 12
 CL18414Contig1 -3.36 Pathogenesis-related protein PR-1
 CL26231Contig1 8.30 Pathogenesis-related protein P2
 CL10878Contig1 9.06 Pathogenesis-related protein 1
 CL1932Contig1 3.14 Pathogenesis-related genes transcriptional activator PTI6
 CL51123Contig1 -1.27 Protein ENHANCED DISEASE RESISTANCE 2-like
 CL8780Contig1 -2.77 Putative disease resistance RPP13-like protein 1
 CL512Contig2 -1.12 S-norcoclaurine synthase 2
 comp53156_c0_seq3_1 1.57 Wound-induced protein 1
 CL48028Contig1 1.94 Universal stress protein A-like protein
 CL19588Contig1 1.52 TMV resistance protein N
 CL21402Contig1 2.24 TMV resistance protein N
Transcription factor
 CL30475Contig1 1.40 MYB family transcription factor EFM
 CL50886Contig1 1.85 MYB family transcription factor EFM
 CL32159Contig1 -1.18 Transcription factor MYB59
 comp75186_c0_seq1_2 -2.36 Transcription factor MYB44
 CL54017Contig1 4.45 NAC domain-containing protein 79
 CL26897Contig1 3.15 Probable WRKY transcription factor 70
 CL2070Contig1 3.32 Probable WRKY transcription factor 69
 comp64969_c0_seq1_1 1.17 Transcription factor TCP4
 CL45926Contig1 2.78 Transcription factor TCP20
 CL28172Contig1 -1.71 Transcription factor SRM1
 CL25039Contig1 1.86 Transcription factor GTE12
 CL38022Contig1 -1.73 Transcription factor EMB1444
 comp44643_c0_seq12_3 -1.34 Transcription factor DIVARICATA
 CL10732Contig1 -4.66 Transcription factor bHLH92
Wax biosynthetic process
 CL13276Contig1 -2.12 3-ketoacyl-CoA synthase 6
 CL6623Contig1 -1.52 3-ketoacyl-CoA synthase 6
 CL26021Contig1 -1.97 3-ketoacyl-CoA synthase 4
 comp31671_c0_seq2_2 -1.77 3-ketoacyl-CoA synthase 2
 comp37543_c1_seq2_3 -1.94 3-ketoacyl-CoA synthase 12
 CL141Contig1 -1.38 3-ketoacyl-CoA synthase 11
 CL51488Contig1 -1.53 3-ketoacyl-CoA synthase 10
 CL26445Contig1 -1.62 Acyl-[acyl-carrier-protein] desaturase, chloroplastic
 CL23269Contig1 1.87 Long chain acyl-CoA synthetase 4
 CL26279Contig1 -1.47 Omega-hydroxypalmitate O-feruloyl transferase
 CL778Contig1 -4.27 Omega-hydroxypalmitate O-feruloyl transferase
 CL26276Contig1 -2.45 Protein ECERIFERUM 1
 CL32066Contig1 -2.54 Protein ECERIFERUM 1
 CL1392Contig2 -1.83 Protein HOTHEAD
 comp50398_c2_seq5_3 -3.10 Protein HOTHEAD
 CL50895Contig1 -1.71 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2
Photosynthesis
 CL42418Contig1 -1.46 Photosystem II reaction center W protein, chloroplastic
 CL7255Contig1 -1.06 Photosystem II protein psbY-2, chloroplastic
 CL30417Contig1 -1.64 Photosystem II 5 kDa protein, chloroplastic
 CL46717Contig1 -12.75 Photosystem I reaction center subunit psaK, chloroplastic
 CL21783Contig1 -2.04 Photosystem I reaction center subunit N, chloroplastic
 CL22180Contig1 -1.19 Photosystem I reaction center subunit III, chloroplastic
 CL782Contig1 -1.60 Photosystem I reaction center subunit III, chloroplastic
 comp67722_c4_seq2_2 -1.27 Chlorophyll a-b binding protein of LHCII type I
 CL31939Contig1 -1.44 Chlorophyll a-b binding protein of LHCII type 1
 CL13308Contig1 -2.15 Chlorophyll a-b binding protein CP29.1, chloroplastic
 CL20903Contig1 -2.34 Chlorophyll a-b binding protein CP29.1, chloroplastic
 comp69242_c0_seq1_2 -13.19 Chlorophyll a-b binding protein CP29.1, chloroplastic
 CL30759Contig1 -2.02 Chlorophyll a-b binding protein CP26, chloroplastic
 CL55345Contig1 -1.76 Chlorophyll a-b binding protein CP24 10A, chloroplastic
 CL25433Contig1 -1.05 Chlorophyll a-b binding protein 8, chloroplastic
 CL11837Contig1 -1.38 Chlorophyll a-b binding protein 7, chloroplastic
 CL54964Contig1 -1.28 Chlorophyll a-b binding protein 7, chloroplastic
 CL55558Contig1 -13.46 Chlorophyll a-b binding protein 4, chloroplastic
 CL23730Contig1 -2.31 Chlorophyll a-b binding protein 3, chloroplastic
 CL38334Contig1 -2.17 Chlorophyll a-b binding protein 3, chloroplastic
 CL2559Contig1 -1.59 Chlorophyll a-b binding protein 151, chloroplastic
 CL2559Contig2 -1.86 Chlorophyll a-b binding protein 151, chloroplastic