Skip to main content

Table 1 DE-lncRNAs and their targets among the significantly enriched GO terms

From: Identification, characterization and functional analysis of gonadal long noncoding RNAs in a protogynous hermaphroditic teleost fish, the ricefield eel (Monopterus albus)

Comparison

DE-lncRNA (number)

Trans-targets

GO terms

Term type

OV vs. IE

XLOC_059262(45)

foxo1

Regulation of biological process

BP

XLOC_138801(29)

foxm1

Regulation of cellular process

BP

IE vs. IM

XLOC_181771(35)

smad3

Regulation of cellular process

BP

XLOC_138801(29)

foxm1

Regulation of biological process

BP

Biological regulation

BP

XLOC_064006(2)

foxr1

Regulation of biological process

BP

Biological regulation

BP

IM vs. IL

XLOC_059262(45)

foxo1

Regulation of biological process

BP

XLOC_181771(35)

smad3

Regulation of biological process

BP

XLOC_138801(29)

foxm1

Regulation of cellular process

BP

Biological regulation

BP

XLOC_169543(38)

camk4

Cellular process

BP

IL vs. TE

XLOC_059262(45)

foxo1

Transmembrane signaling

MF

Receptor activity

MF

XLOC_181771(35)

smad3

Regulation of cellular process

BP

Biological regulation

BP

XLOC_138801(29)

foxm1

Biological regulation

BP

XLOC_169543(38)

camk4

Membrane

CC

109,964,303 (3)

ar

Signaling receptor activity

MF

Signal transducer activity

MF

Receptor activity

MF

Molecular transducer activity

MF

Signal transduction

BP

Single organism signaling

BP

Signaling

BP

Cell communication

BP

Regulation of biological process

BP

Cellular response to stimulus

BP

Response to stimulus

BP

  1. Note: lncRNA (number): the listed lncRNA Gene IDs are those with the smallest P-values, and numbers in parentheses are the numbers of lncRNAs; see Schedule Data 4 for details. OV Ovary stage, IE Early intersexual stage, IM Middle intersexual stage, IL Late intersexual stage, TE Testis stage. BP Biological process, CC Cellular component, MF Molecular function