Fig. 1From: Cultivar-specific markers, mutations, and chimerisim of Cavendish banana somaclonal variants resistant to Fusarium oxysporum f. sp. cubense tropical race 4Pipeline for identifying unique SNVs in three TBRI Foc TR4–resistant cultivars using RNA-seq data. The numbers of SNV sites retained after each step are indicated. SplitNCigarReads, split reads with N in Cigar; DP, depth coverage; AD, depth of coverage of each allele per sample; QD, variant confidence normalized by the unfiltered depth of variant samples; FS, strand bias estimated using Fisher’s exact testBack to article page