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Table 4 Prediction of pili cluster in S. parasuis genomes

From: Genomic characterization of Streptococcus parasuis, a close relative of Streptococcus suis and also a potential opportunistic zoonotic pathogen

Strains

srtA

srtF cluster

srt1 cluster

srtF

sfp1

sfp2

sipF

srt1

s1p1

s1p2

10–36,905

GLP18_07430

GLP18_08055

GLP18_08050

GLP18_08045

GLP18_08040

GLP18_01855

GLP18_01860

GLP18_01865

86–5192

SST18_RS0106025

SST18_RS0102600

SST18_RS0102595

SST18_RS0102590

SST18_RS0102585

SST18_RS0100080

SST18_RS1000000111105

SST18_RS0100090

88–1861

SST34_RS0102675

    

SST34_RS0100095

SST34_RS1000000112435

SST34_RS0100105

89–4109-1

SST23_RS0109685

SST23_RS0103550

SST23_RS0103555

SST23_RS0103560

SST23_RS0103565

SST23_RS0105610

SST23_RS0105615

SST23_RS0105620

4253

EXW74_04430

    

EXW74_02595

EXW74_02600

EXW74_02605

BS26

JOA01_RS04580

JOA01_RS09350

JOA01_RS09355

JOA01_RS09360

JOA01_RS09365

JOA01_RS07550

JOA01_RS07555

JOA01_RS07560

BS27

JM961_05600

JM961_08150

JM961_08155

JM961_08160

JM961_08165

JM961_02310

JM961_02315

JM961_02320

H35

KQ224_RS01520

    

KQ224_RS09100

KQ224_RS09095

KQ224_RS09090

SUT-7

SUT007_10200

    

SUT007_17200

SUT007_17190

SUT007_17200

SUT-286

L6410_RS04875

L6410_RS02040

L6410_RS02035

L6410_RS02030

L6410_RS02025

L6410_RS08605

L6410_RS08605

L6410_RS08615

SUT-319

+*

+

+

+

+

+

+

+

SUT-328

+

+

+

+

+

+

+

+

SUT-380

SUT380_09340

SUT380_03770

SUT380_03760

SUT380_03770

SUT380_03740

SUT380_16370

SUT380_16380

SUT380_16390

SUT-503

SUT503_09340

SUT503_19780

SUT503_19790

SUT503_19800

SUT503_19810

SUT503_16330

SUT503_16340

SUT503_16350

Strains

srtA

srt2345 cluster

Genotype

srt2

srt3

srt4

srt5

s2p1

s2p2

s2p3

s2p4

sip2

10–36,905

GLP18_07430

GLP18_05745

GLP18_05740

GLP18_05735

GLP18_05730

GLP18_05750

GLP18_05755

GLP18_05725

GLP18_05720

GLP18_05715

A

86–5192

SST18_RS0106025

SST18_RS0101355

SST18_RS0101360

SST18_RS0101365

SST18_RS0101370

SST18_RS1000000111685, SST18_RS1000000111690

SST18_RS0101345

SST18_RS0101375

SST18_RS1000000111110

SST18_RS0101385

A

88–1861

SST34_RS0102675

         

B

89–4109-1

SST23_RS0109685

   

SST23_RS0101320

  

SST23_RS0101315

SST23_RS1000000111440

SST23_RS0101305

C

4253

EXW74_04430

         

B

BS26

JOA01_RS04580

         

D

BS27

JM961_05600

         

D

H35

KQ224_RS01520

         

B

SUT-7

SUT007_10200

         

B

SUT-286

L6410_RS04875

L6410_RS10595

L6410_RS10600

L6410_RS10605

L6410_RS10610

L6410_RS10585, L6410_RS10590

L6410_RS10580

L6410_RS10615

L6410_RS10620

L6410_RS10625

A

SUT-319

+*

         

D

SUT-328

+

         

D

SUT-380

SUT380_09340

         

D

SUT-503

SUT503_09340

         

D

  1. * SUT-319 and SUT-328 haven’t be annotated by NCBI and do not have the locus tag