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Table 1 Amino acid specificity of detected PTMs in our study

From: Assessment of label-free quantification and missing value imputation for proteomics in non-human primates

Amino Acid Specificity

PTMs identified in our study

Cysteine (C)

Nitrosylation, Ammonia loss, Carbamyl

Aspartate (D)

Carboxylation, Calcium, Fe [II], Sodium, Fe [III], Zinc, Potassium, Magnesium, Cu [I]

Glutamate (E)

Carboxylation, Calcium, Fe [II], Sodium, Fe [III], Zinc, Potassium, Magnesium, Cu [I], Water Loss

Lysine (K)

Methylation, Formylation, Hydroxylation, Trimethylation, Acetylation, Glutarylation, Succinylation, Butyrylation, Crotonylation, Malonylation, Dimethylation, Hydroxybutyrylation, Carboxylation, Pyridoxal phosphate, Carbamyl

Methionine (M)

Oxidation, Carbamyl

Asparagine (N)

Hydroxylation, Deamidation, Ammonia loss

Proline (P)

Hydroxylation

Glutamine (Q)

Deamidation

Arginine (R)

Citrullination, Methylation, Dimethylation, Carbamyl

Serine (S)

Phosphorylation, ADP-ribosylation, HexNAc

Threonine (T)

Phosphorylation, HexNAc

N-Terminal (X)

Acetylation, Carbamyl

Tyrosine (Y)

Sulfonation, Nitrosylation, Phosphorylation