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Fig. 3 | BMC Genomics

Fig. 3

From: Analysis of repeat elements in the Pristionchus pacificus genome reveals an ancient invasion by horizontally transferred transposons

Fig. 3

Expression of TEs and simple repeats. A Investigation of single-exonic transcripts fully overlapping repeat sequences revealed the best candidates for active transposons. B Further analysis identified the CR1, Sola-3, RTE, TcMar-Tc1, Gypsy and Pao superfamilies as the most overrepresented superfamilies among DNA transposons, LINEs and LTRs with 100% exon coverage in single-exon transcripts. The threshold for determining the most abundant superfamilies was set at a coverage of at least 20 single-exon transcripts

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BMC Genomics

ISSN: 1471-2164

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