Table 1 List of 56 CsPP2C genes and their basic characterizations
From: Genome-wide identification and expression analysis of the cucumber PP2C gene family
Gene identifier | Gene name | Size (aa) | Mass (kDa) | pI | Instability index | Aliphatic index | Grand average of hydropathicity | Subcellular localization |
|---|---|---|---|---|---|---|---|---|
CsaV3_1G004080.1 | CsPP2C1 | 348 | 37.934 | 7.67 | 28.63 | 89.97 | −0.299 | Nuclear |
CsaV3_1G034580.1 | CsPP2C2 | 426 | 46.884 | 5.06 | 57.49 | 73.66 | −0.45 | Nuclear |
CsaV3_1G035680.1 | CsPP2C3 | 358 | 39.549 | 5.26 | 69.22 | 72.4 | −0.499 | Chloroplast |
CsaV3_1G036330.1 | CsPP2C4 | 392 | 42.073 | 5.97 | 52.12 | 83.93 | −0.194 | Chloroplast |
CsaV3_1G038430.1 | CsPP2C5 | 370 | 41.493 | 8.01 | 38.05 | 84.84 | −0.254 | Nuclear |
CsaV3_1G038460.1 | CsPP2C6 | 428 | 46.271 | 7.96 | 32.07 | 87.01 | −0.173 | Chloroplast |
CsaV3_1G039750.1 | CsPP2C7 | 380 | 41.393 | 5.24 | 54.5 | 78.47 | −0.323 | Chloroplast |
CsaV3_2G003570.1 | CsPP2C8 | 357 | 39.617 | 5.27 | 48.44 | 76.78 | −0.341 | Nuclear |
CsaV3_2G006810.1 | CsPP2C9 | 367 | 40.752 | 6.08 | 40.34 | 78.88 | −0.283 | Nuclear |
CsaV3_2G010540.1 | CsPP2C10 | 484 | 53.551 | 5.74 | 42.41 | 74.32 | −0.508 | Chloroplast |
CsaV3_2G012660.1 | CsPP2C11 | 275 | 31.235 | 9.51 | 43.29 | 76.22 | −0.471 | Chloroplast |
CsaV3_2G016210.1 | CsPP2C12 | 397 | 44.019 | 8.96 | 46.3 | 87.41 | −0.313 | Chloroplast |
CsaV3_2G024970.1 | CsPP2C13 | 424 | 46.836 | 8.25 | 53.61 | 85.94 | −0.302 | Cytoplasmic |
CsaV3_2G033210.1 | CsPP2C14 | 309 | 34.579 | 6.29 | 46.91 | 82.33 | −0.384 | Cytoplasmic |
CsaV3_3G000550.1 | CsPP2C15 | 390 | 42.936 | 7.7 | 46.19 | 90.44 | −0.219 | Nuclear |
CsaV3_3G001890.1 | CsPP2C16 | 813 | 89.039 | 5.29 | 46.54 | 76.17 | −0.473 | Nuclear |
CsaV3_3G003600.1 | CsPP2C17 | 523 | 57.737 | 5.39 | 50.39 | 75.3 | −0.409 | Nuclear |
CsaV3_3G013890.1 | CsPP2C18 | 414 | 45.372 | 5.27 | 33.49 | 84.69 | −0.282 | Chloroplast |
CsaV3_3G014600.1 | CsPP2C19 | 521 | 56.883 | 5.31 | 42.17 | 89.08 | −0.227 | Nuclear |
CsaV3_3G016530.1 | CsPP2C20 | 421 | 45.192 | 5.61 | 68.05 | 74.8 | −0.302 | Nuclear |
CsaV3_3G019720.1 | CsPP2C21 | 387 | 42.372 | 5.39 | 42 | 90.03 | −0.105 | Chloroplast |
CsaV3_3G022030.1 | CsPP2C22 | 349 | 38.668 | 5.54 | 36.64 | 78.51 | −0.406 | Chloroplast |
CsaV3_3G027970.1 | CsPP2C23 | 233 | 26.258 | 6.76 | 36.69 | 81.2 | −0.488 | Chloroplast |
CsaV3_3G035300.1 | CsPP2C24 | 370 | 41.113 | 8.84 | 39.84 | 91.68 | −0.326 | Nuclear |
CsaV3_3G038810.1 | CsPP2C25 | 390 | 43.875 | 7.18 | 7.18 | 88.46 | −0.299 | Chloroplast |
CsaV3_3G043720.1 | CsPP2C26 | 424 | 46.135 | 5.61 | 41.4 | 91.46 | −0.119 | Chloroplast |
CsaV3_3G047510.1 | CsPP2C27 | 281 | 31.084 | 6.51 | 36.8 | 88.86 | −0.351 | Chloroplast |
CsaV3_4G009460.1 | CsPP2C28 | 236 | 26.175 | 6.07 | 40.16 | 87.63 | −0.453 | Cytoplasmic |
CsaV3_4G025000.1 | CsPP2C29 | 712 | 79.584 | 5.76 | 40.03 | 72.46 | −0.574 | Nuclear |
CsaV3_4G026720.1 | CsPP2C30 | 446 | 49.889 | 8.55 | 39.04 | 71.41 | −0.591 | Nuclear |
CsaV3_4G033570.1 | CsPP2C31 | 283 | 31.385 | 5.88 | 37.1 | 81.98 | −0.398 | Cytoplasmic |
CsaV3_4G034220.1 | CsPP2C32 | 428 | 46.643 | 5.49 | 48.53 | 79.25 | −0.303 | Chloroplast |
CsaV3_4G035500.1 | CsPP2C33 | 325 | 35.755 | 5.32 | 44.62 | 86.4 | −0.26 | Nuclear |
CsaV3_4G036320.1 | CsPP2C34 | 293 | 31.576 | 5.07 | 43.56 | 78.26 | −0.313 | Cytoplasmic |
CsaV3_4G036470.1 | CsPP2C35 | 364 | 39.767 | 5.22 | 33.4 | 73.46 | −0.374 | Chloroplast |
CsaV3_4G037450.1 | CsPP2C36 | 386 | 41.981 | 5.31 | 54.25 | 82.9 | −0.199 | Nuclear |
CsaV3_5G006460.1 | CsPP2C37 | 389 | 43.513 | 7.24 | 42.56 | 93.7 | −0.23 | Chloroplast |
CsaV3_5G010270.1 | CsPP2C38 | 363 | 39.279 | 6.68 | 58.25 | 80.83 | −0.269 | Chloroplast |
CsaV3_5G034510.1 | CsPP2C39 | 433 | 46.590 | 8.64 | 39.69 | 85.36 | −0.194 | Chloroplast |
CsaV3_6G000080.1 | CsPP2C40 | 372 | 40.917 | 5.27 | 54.21 | 91.48 | −0.177 | Cytoplasmic |
CsaV3_6G001340.1 | CsPP2C41 | 402 | 44.641 | 5.91 | 61.87 | 73.71 | −0.533 | Chloroplast |
CsaV3_6G003780.1 | CsPP2C42 | 400 | 44.337 | 8.83 | 32.12 | 78 | −0.416 | Cytoplasmic |
CsaV3_6G005520.1 | CsPP2C43 | 403 | 44.260 | 4.5 | 31.29 | 83.4 | −0.268 | Cytoplasmic |
CsaV3_6G016880.1 | CsPP2C44 | 715 | 79.492 | 5.73 | 37.16 | 82.64 | −0.473 | Nuclear |
CsaV3_6G022710.1 | CsPP2C45 | 349 | 38.860 | 8.59 | 42.43 | 77.59 | −0.406 | Nuclear |
CsaV3_6G028560.1 | CsPP2C46 | 377 | 42.560 | 6.34 | 41.69 | 89.2 | −0.294 | Cytoplasmic |
CsaV3_6G031110.1 | CsPP2C47 | 275 | 30.192 | 5.24 | 36.02 | 81.93 | −0.268 | Chloroplast |
CsaV3_6G032130.1 | CsPP2C48 | 553 | 59.388 | 4.7 | 48.54 | 85.17 | −0.158 | Endoplasmic reticulum |
CsaV3_6G047490.1 | CsPP2C49 | 398 | 44.604 | 7.27 | 53.52 | 88.87 | −0.24 | Chloroplast |
CsaV3_6G052400.1 | CsPP2C50 | 275 | 30.748 | 4.9 | 51.66 | 84.73 | −0.446 | Cytoskeleton |
CsaV3_7G001180.1 | CsPP2C51 | 287 | 31.871 | 9.61 | 46.22 | 97.42 | −0.137 | Chloroplast |
CsaV3_7G004290.1 | CsPP2C52 | 471 | 51.927 | 5.12 | 50.33 | 69.94 | −0.417 | Chloroplast |
CsaV3_7G005840.1 | CsPP2C53 | 291 | 31.923 | 8.76 | 30.42 | 90.1 | −0.331 | Cytoplasmic |
CsaV3_7G007970.1 | CsPP2C54 | 382 | 42.507 | 8.51 | 47.81 | 89.06 | −0.277 | Chloroplast |
CsaV3_7G030300.1 | CsPP2C55 | 393 | 43.077 | 4.64 | 52.99 | 89.52 | −0.161 | Cytoplasmic |
CsaV3_7G031840.1 | CsPP2C56 | 367 | 40.317 | 5.05 | 38.99 | 68.88 | −0.496 | Chloroplast |