Table 1 The PEBP genes family members in Brassica juncea var. tumida
From: Genome-wide analysis and identification of the PEBP genes of Brassica juncea var. Tumida
Gene_id | Gene_name | chr | Start-end | Sence+/antisence- | Pfam domain | Protein(aa) | MW | PI | Subcellular location | At homolog |
|---|---|---|---|---|---|---|---|---|---|---|
BjuB048175 | BjFT1 | B02 | 33,175,908–33,178,027 | + | 130 | 175 | 19810.43 | 7.75 | Chlo、cyto、nucl、mito、plas | AtFT |
BjuO006613 | BjFT2 | Contig429 | 24,278–26,797 | + | 132 | 175 | 19810.43 | 7.75 | Chlo、cyto、nucl、plas | AtFT |
BjuB043970 | BjFT3 | B03 | 27,650,574–27,653,574 | - | 116 | 170 | 19197.79 | 8.68 | Cyto、chlo、extr、nucl | AtFT |
BjuA029389 | BjTSF1 | A07 | 18,288,301–18,293,021 | - | 134 | 176 | 19945.67 | 7.72 | Chlo、cyto、extr | AtTSF |
BjuB020451 | BjBFT1 | B06 | 6,684,085–6,684,954 | + | 137 | 177 | 20061.06 | 9.45 | cyto、nucl、plas、cysk | AtBFT |
BjuA022875 | BjBFT2 | A06 | 17,261,662–17,262,565 | + | 137 | 177 | 20146.12 | 9.51 | cyto、nucl、plas、cysk | AtBFT |
BjuA022180 | BjMFT1 | A06 | 6,713,651–6,722,725 | - | 99 | 135 | 14790.04 | 6.82 | cyto、extr | AtMFT |
BjuA044292 | BjMFT2 | A09 | 50,665,724–50,667,446 | + | 132 | 173 | 19070.04 | 8.79 | cyto、extr | AtMFT |
BjuB032383 | BjMFT3 | B03 | 15,228,277–15,229,987 | - | 132 | 173 | 19070.04 | 8.79 | cyto、extr | AtMFT |
BjuB022680 | BjMFT4 | B04 | 21,491,623–21,493,549 | - | 131 | 173 | 19062.04 | 8.76 | cyto、extr | AtMFT |
BjuB029247 | BjMFT5 | B04 | 19,746,538–19,748,461 | - | 131 | 173 | 19062.04 | 8.76 | cyto、extr | AtMFT |
BjuB038969 | BjTFL1 | B08 | 862,896–863,943 | - | 135 | 177 | 20154.29 | 9.69 | cyto、extr | AtTFL1 |
BjuA008949 | BjTFL2 | A03 | 804,140 -805,199 | - | 135 | 177 | 20111.22 | 9.56 | cyto、extr | AtTFL1 |
BjuB012624 | BjTFL3 | B05 | 18,474,225–18,475,277 | + | 135 | 179 | 20363.36 | 8.79 | cyto、extr | AtTFL1 |
BjuB048699 | BjTFL4 | B02 | 52,307,789–52,308,864 | + | 137 | 178 | 20269.2 | 9 | cyto、extr、pero | AtTFL1 |
BjuA040052 | BjTFL5 | A10 | 18,936,879–18,937,941 | + | 137 | 178 | 20401.45 | 9.51 | cyto、extr、plas | AtTFL1 |
BjuB004009 | BjPYBHB1 | B06 | 27,302,591–27,303,332 | + | 143 | 162 | 17794.28 | 5.34 | cyto、extr、E.R | PYBHB |
BjuA040212 | BjPYBHB2 | A10 | 19,806,740–19,808,567 | - | 142 | 314 | 33748.74 | 6.03 | Chlo、mito | PYBHB |
BjuA026251 | BjATC1 | A07 | 18,288,301–18,293,021 | + | 112/137 | 281 | 31492.97 | 9.51 | cyto | AtATC |
BjuB046109 | BjATC2 | B08 | 30,494,732–30,496,447 | + | 131 | 175 | 19877.74 | 7.85 | cyto、nucl | AtATC |
BjuB021008 | BjATC3 | B06 | 11,137,277–11,138,906 | - | 130 | 174 | 19804.64 | 6.58 | Cyto | AtATC |