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Fig. 2 | BMC Genomics

Fig. 2

From: Genome characteristics of clinical Salmonella enterica population from a state public health laboratory, New Hampshire, USA, 2017–2020

Fig. 2

Midpoint-rooted maximum likelihood phylogenetic tree based on 3265 core genes. The scale bar represents the number of nucleotide substitutions per site. Serotype identity shown here is based on the agglutination serotyping method. The black stars on the tip of branches indicate the 33 isolates that had conflicting results from the agglutination test and SeqSero2. BAPS clusters (outermost ring) indicate the sequence clusters determined by RhierBAPS

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