Skip to main content

Table 6 Putative E3 ubiquitin ligase genes identified in Aplysia. See Table 1 for table format description

From: In search of the Aplysia immunome: an in silico study

  Required Domains Genes
Name Strict Relaxed Count Accessions
HOIL1 IPR044066, IPR000626, IPR027370, IPR001876 IPR026261, IPR001841, IPR036443 1 LOC101863809
HOIP IPR002867, IPR018997, IPR032065, IPR041031, IPR044066, IPR001876 IPR026254, IPR001876 1 LOC101849805
IAPs IPR001370   22 See supplemental file SFile3
MEX3C IPR004088, IPR001841 IPR036612, IPR013083 1 LOC101854000
Pellino IPR006800   1 LOC101863733
RNF134/RIPLET IPR042723, IPR001841 IPR001870, IPR001841 2 LOC101862807, LOC101858054
SHARPIN IPR031912, IPR001876, IPR029071 IPR026261, IPR000626, IPR036443 1 LOC101863809
SOCS IPR035862, IPR001496 IPR036036, IPR000980 5 LOC101863556, LOC101857639, LOC101854668, LOC101856240, LOC101864191
TRAF IPR001293, IPR002083, IPR001841 IPR043211, IPR002083 7 See supplemental file SFile3
TRIM IPR000315, IPR001841 22 See supplemental file SFile3
TRIM25/65 IPR001870, IPR003877, IPR001841 IPR013320, IPR043136, IPR013083 2 LOC101862807, LOC101858054