Table 1 Cold resistance genes discovery based on RNA-seq and QTL mapping
Classification | Gene ID | Annotation | log2FC | |||
|---|---|---|---|---|---|---|
RG60dvsRG0d | SY60dvsSY0d | SY0dvsRG0d | SY60dvsRG60d | |||
KEGG Enrichment pathway | Vitvi07g00283 | Glutathione S-transferase APIC | -4.88 | 0.15 | -1.03 | 4.04 |
Vitvi07g02190 | Glutathione S-transferase PARB | -4.20 | 0.52 | -1.37 | 3.38 | |
Vitvi12g00080 | Glutathione S-transferase F9 | 0.51 | 0.67 | 2.01 | 2.20 | |
Vitvi07g02189 | Glutathione S-transferase F13 | -5.73 | 1.02 | -1.66 | 5.11 | |
Vitvi11g00301 | Auxin-responsive protein IAA27 | -0.41 | 0.85 | 0.03 | 1.29 | |
Vitvi08g02133 | Auxin-responsive protein SAUR71 | 1.94 | 0.65 | 2.52 | 1.24 | |
GO Enrichment pathway | Vitvi09g00108 | AP2-like ethylene-responsive transcription factor AIL1 | -0.27 | 0.34 | 0.90 | 1.52 |
QTL Mapping& RNA-Seq | Vitvi06g00024 | Myb-related protein 2 | 0.85 | 0.74 | 0.65 | 0.55 |
Vitvi17g00036 | Auxin response factor 2A | 1.06 | 0.30 | 1.44 | 0.70 | |
Vitvi17g00037 | Transcription factor ICE1 | -1.63 | 0.04 | -0.59 | 1.11 | |
Transcription factor | Vitvi09g00339 | Transcription factor bHLH68 | -0.62 | 0.42 | 0.10 | 1.16 |
Vitvi02g00202 | bHLH transcription factor bHLH156 | -0.34 | 0.45 | 0.55 | 1.35 | |
Vitvi17g00238 | Myb-like protein L | 0.03 | 0.11 | 1.46 | 1.57 | |
Vitvi07g00046 | bHLH transcription factor bHLH059 | -0.96 | 0.09 | 0.51 | 1.58 | |
Vitvi11g00320 | Myb-related protein 3R-1 | -2.45 | 0.76 | -1.61 | 1.62 | |
Vitvi01g00232 | Transcription factor bHLH30 | -1.67 | 0.33 | -0.01 | 2.01 | |
Vitvi14g01907 | Probable WRKY transcription factor 72 | -0.15 | 0.60 | 2.96 | 3.70 | |