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Fig. 1 | BMC Genomics

Fig. 1

From: Simultaneous testing of rule- and model-based approaches for runs of homozygosity detection opens up a window into genomic footprints of selection in pigs

Fig. 1

Workflow of ROH detection pipeline. Fastq files were used as input, variants were called, quality controlled and underwent ROH detection with the rule-based ROH detection approach implemented in PLINK and the model-based ROH detection approach run by RZooRoH. Finally, ROHRs were identified and investigated for potential genes of interest using functional enrichment analysis. A ROHRs-merging step was run as optional for particular applications

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