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Fig. 5 | BMC Genomics

Fig. 5

From: Performance comparison of Agilent new SureSelect All Exon v8 probes with v7 probes for exome sequencing

Fig. 5

Density plot showing Mean Depth vs. %GC content for: a Agilent v7; b Agilent v8. Density plot showing %GC content vs. mean depth. The data in this plot was collected by merging all samples from the V7 and V8 pools. Density estimation was performed using 2D plots. More specifically, we chose data points in a fixed rectangle (%GC content  [0;1], mean depth  [0;1000]) and split it into evenly spaced 200 × 100 grid and counted the data points in each cell of the grid. Finally, we normalised the grid to the range of [0,1] and plotted it using "jet" colormap from matplotlib library

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