Table 1 Average (mean ± SD) results of variant calling of SNV and indels for the samples from the v7 and v8 pools using their own target (bed v7, bed v8) and target intersection (bed v7 vs. v8) filtered by DP > 13 and QUAL > 30
Design | Variant type | Count on target v7 (35.7 Mb) | Count on target v8 (35.1 Mb) | Count on target V7 cross v8 (34.84 Mb) |
|---|---|---|---|---|
V7 pool | SNV | 25 736 ± 380 | - | 24 374 ± 347 |
indel | 743 ± 22 | - | 612 ± 18 | |
V8 pool | SNV | - | 25 558 ± 362 | 25 120 ± 355 (+ 3.06%) |
indel | - | 699 ± 18 | 664 ± 17 (+ 8.49%) |