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Fig. 3 | BMC Genomics

Fig. 3

From: Reducing costs for DNA and RNA sequencing by sample pooling using a metagenomic approach

Fig. 3

Comparison of RNA-seq data for pooled and non-pooled samples. Dickeya dadantii expression ratio between genes of different sample combinations. R2 values for gene expression of compared data sets are indicated above individual columns. Escherichia coli expression ratio between genes of different sample combinations. R2 values for gene expression of compared data sets are indicated above individual columns. Vibrio natriegens expression ratio between genes of different sample combinations. R2 values for gene expression of compared data sets are indicated above individual columns. D Assignment of reads to the wrong organism in pairwise pooling caused by sequence errors in RNA-seq data. 10 −6 indicates a lost read in one million reads. The asterisk indicates the position of the read error. The dotted box indicates the selected match of the read. Colors indicate the origin of the reads and the mapped genome

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