Table 2 Statistics of the quality and alignment efficiency of transcriptome sequencing
Sample | Raw Reads | Clean Reads (%) | Reads mapped (%) | Mapped to exon (%) | Clean Base (G) | Q30 (%) |
|---|---|---|---|---|---|---|
H1 | 57,607,030 | 56,456,182 (98.00) | 53,525,206 (94.81%) | 78.70 | 8.47 | 93.8 |
H2 | 67,485,908 | 66,252,450 (98.17) | 63,065,876 (95.19%) | 85.88 | 9.94 | 95.36 |
H3 | 59,360,730 | 58,221,334 (98.08) | 55,414,202 (95.18%) | 87.85 | 8.73 | 95.22 |
L1 | 67,336,812 | 66,247,312 (98.38) | 62,894,562 (94.94%) | 83.57 | 9.94 | 94.94 |
L2 | 64,402,184 | 63,211,670 (98.15) | 60,222,790 (95.27%) | 87.50 | 9.48 | 95.24 |
L3 | 62,628,782 | 61,565,326 (98.30) | 58,822,760 (95.55%) | 86.58 | 9.23 | 95.55 |