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Fig. 7 | BMC Genomics

Fig. 7

From: A map of cis-regulatory modules and constituent transcription factor binding sites in 80% of the mouse genome

Fig. 7

Comparison of our CRMs (p-value < 0.05) with the cCREs and the EnhancerAtlas enhancers. A Percentage of the genome covered by all the sequences of the CRMs, the cCREs and the EnhancerAtlas enhancers (All), and by the sequences in the CRMs, the cCREs and the EnhancerAtlas enhancers, which at least partially overlap the peak-covered genome regions (Partially overlap). B Upset plot showing numbers of nucleotide positions shared and unshared among the sequences in the three sets of predicted CRMs. C Distributions of phyloP scores of nucleotide positions of the cCREs and the EnhancerAtlas enhancers that are shared and unshared with our CRMs (p-value ≤ 0.05). D Comparison of sensitivity of the three sets of predicted CRMs for recalling FANTOM promoters and Vista enhancers. E Distributions of lengths of the CRMs, EnhancerAtlas enhancers and cCREs. The inset is a zooming-in view of the indicated range of the vertical axis

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