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Fig. 1 | BMC Genomics

Fig. 1

From: Genome sequence of the entomopathogenic Serratia entomophila isolate 626 and characterisation of the species specific itaconate degradation pathway

Fig. 1

Inferred phylogeny of Serratia entomophila within the Serratia genus. A 16S rDNA Maximum likelihood tree of 18 sequenced Serratia spp. Percentage of trees shown in which the associated taxa cluster together is shown next to the branches. Branch lengths measured in the number of substitutions per site. This analysis assessed 17 members of the Serratia genus with Yersinia pestis used as an outgroup. Accession numbers for each 16S sequenced used is shown in square brackets. Serratia entomophila 626 is indicated in bold. B Functional genome distribution (FGD) analysis of representative complete Serratia genomes. The predicted ORFeomes of all 6 genomes were subjected to an FGD analysis [24], and the resulting distance matrix was imported into MEGA11 [25]. The functional distribution was visualized using the UPGMA method [26]. C Nonrecombinant core phylogeny of S. entomophila 626 and 12 representatives of the Serratia genus including the S. entomophila A1 type strain

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