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Fig. 3 | BMC Genomics

Fig. 3

From: Genome sequence of the entomopathogenic Serratia entomophila isolate 626 and characterisation of the species specific itaconate degradation pathway

Fig. 3

Genome atlas for Serratia entomophila 626. The genome atlas outermost circle shows BlastP similarities against the five Serratia isolates assessed in the study. Regions in blue represent unique proteins whereas red indicates high levels of conservation. Inner circle 2 shows GC content deviation, where dips below the average GC content are shown in green, and high spikes in orange. Circle 3 shows annotations of rRNA (Green) and tRNAs (Red) encoded on the forward and reverse strand. Circle 4 shows ORF orientation either in sense (+, Red) or antisense (-, Blue) orientation. Circle 5 shows the prediction of Signal peptide domains. Outer circle 6 shows assigned COG classification assigned into categories 1–5, 1) Information storage processing 2) cellular processes and signalling 3) metabolism 4) poor characterisation 5) uncharacterised or no assignment. The final innermost circle shows GC skew. Unique regions and phages are highlighted and numbered. Phage_1 denotes the DinI encoding phage. Unique_6 denotes position of the Itaconate degradation operon

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