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Table 2 Over-enriched GO terms for genes that are differentially expressed between resistant and susceptible GWSS

From: Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California

Insecticide Status

GO Category

GO ID

GO Term

p-adjusted

q-value

Gene count

Resistant

MF

GO:0004222

metalloendopeptidase activity

< 0.001

< 0.001

11

Resistant

MF

GO:0008237

metallopeptidase activity

< 0.001

< 0.001

11

Resistant

MF

GO:0005506

iron ion binding

< 0.001

< 0.001

8

Resistant

MF

GO:0016705

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

< 0.001

< 0.001

8

Resistant

MF

GO:0020037

heme binding

< 0.001

< 0.001

8

Resistant

MF

GO:0046906

tetrapyrrole binding

< 0.001

< 0.001

8

Resistant

MF

GO:0005319

lipid transporter activity

< 0.001

< 0.001

4

Susceptible

MF

GO:0042302

structural constituent of cuticle

< 0.001

< 0.001

28

Susceptible

MF

GO:0005198

structural molecule activity

< 0.001

< 0.001

29

Susceptible

MF

GO:0008061

chitin binding

< 0.001

< 0.001

10

Resistant

BP

GO:0018958

phenol-containing compound metabolic process

< 0.001

< 0.001

3

Resistant

BP

GO:0046189

phenol-containing compound biosynthetic process

< 0.001

< 0.001

3

Resistant

BP

GO:0042440

pigment metabolic process

0.001

< 0.001

3

Resistant

BP

GO:0046148

pigment biosynthetic process

0.001

< 0.001

3

Resistant

BP

GO:0019953

sexual reproduction

0.001

< 0.001

3

Resistant

BP

GO:0032504

multicellular organism reproduction

0.001

< 0.001

3

Resistant

BP

GO:0044703

multi-organism reproductive process

0.001

< 0.001

3

Resistant

BP

GO:0048609

multicellular organismal reproductive process

0.001

< 0.001

3

Resistant

BP

GO:0051704

multi-organism process

0.001

< 0.001

3

Resistant

BP

GO:0006869

lipid transport

0.001

< 0.001

4

Resistant

BP

GO:0010876

lipid localization

0.001

< 0.001

4

Resistant

BP

GO:0000003

reproduction

0.003

< 0.001

3

Resistant

BP

GO:0022414

reproductive process

0.003

< 0.001

3

Resistant

BP

GO:1901617

organic hydroxy compound biosynthetic process

0.004

< 0.001

3

Resistant

BP

GO:1901615

organic hydroxy compound metabolic process

0.021

< 0.001

3

Susceptible

BP

none

none

none

none

none

Resistant

CC

none

none

none

none

none

Susceptible

CC

GO:0005576

extracellular region

< 0.001

< 0.001

13

Susceptible

CC

GO:0005743

mitochondrial inner membrane

0.032

0.011

4

Susceptible

CC

GO:0019866

organelle inner membrane

0.044

0.011

4

  1. Enrichment analysis of molecular functions of genes differentially expressed between resistant and susceptible GWSS identified GO terms that were significantly over-enriched (Bonferroni adjusted p < 0.05). Here we provide whether the term was enriched in genes with higher expression (based on log2 fold change) in resistant or susceptible GWSS populations, the GO category (MF: molecular function, BP: biological process, CC: cellular component), GO ID, GO term, the Bonferroni adjusted p-value, the q-value and the gene count for each enriched term cluster. GO categories with no over-enriched terms are represented in the table using ‘none’
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BMC Genomics

ISSN: 1471-2164

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