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Table 1 Description of the identified homologs of PAs biosynthesis genes in the wheat genome

From: Genome-wide analysis of polyamine biosynthesis genes in wheat reveals gene expression specificity and involvement of STRE and MYB-elements in regulating polyamines under drought

Gene Name

AGI

Symbol

Gene ID

(IWGSC v1.2)

Location

Strand

No. of AAs

Mol. Wt. KDa

pI

Instability index

Arginine decarboxylase

AT2G16500

TaADC1

TraesCS1B02G018200

1B:8772543–8775516

reverse

610

66.5

6.3

30.01

AT4G34710

TaADC2

TraesCS1D02G012300

1D:6475182–6477014

forward

610

66.5

6.55

29.81

 

TaADC3

TraesCSU02G047800

Un:37811053–37813077

reverse

601

66.1

6.8

36.68

 

TaADC4

TraesCS2A02G071200

2A:31694887–31697036

forward

391

42.8

8.98

38.55

Ornithine decarboxylase

absent

TaODC1

TraesCS5B02G336200

5B:519231188–519232830

reverse

408

43.5

5.54

33.52

 

TaODC2

TraesCS5B02G304100

5B:488125651–488126880

reverse

300

32.7

5.37

45.1

 

TaODC3

TraesCS5B02G304200

5B:488190034–488191608

forward

300

NP

NP

42.67

Agmatine iminohydrolase

AT5g08170

TaAIH1

TraesCS2D02G328900

2D:422079023–422085254

forward

379

42.2

5.25

40.15

 

TaAIH2

TraesCS2A02G334600

2A:568399774–568405206

forward

379

42.2

5.25

39.83

 

TaAIH3

TraesCS2B02G347800

2B:494371121–494376445

forward

357

39.5

5.12

36.22

 

TaAIH4

TraesCS5A02G195100

5A:398286820–398290961

reverse

378

42.0

5.31

40.78

 

TaAIH5

TraesCS5D02G198300

5D:301125775–301129288

reverse

424

46.8

5.9

40.55

N-carbamoyl putrescine amidohydrolase

AT2G27450

TaNLP1–1

TraesCS5B02G022300

5B:20829916–20833469

forward

242

27.1

5.57

29.1

 

TaNLP1–2

TraesCS5A02G024500

5A:19223045–19227613

forward

241

27.0

5.57

28.38

S-adenosylmethionine decarboxylase

AT3G02470

TaSAMDC1

TraesCS6A02G219500

6A:407085609–407086775

forward

443

48.3

5.11

44.57

AT5G15950

TaSAMDC2

TraesCS6D02G202500

6D:285869726–285870892

forward

388

42.2

4.93

38.46

AT3G25570

TaSAMDC3

TraesCS6B02G249000

6B:446836280–446837571

forward

388

42

4.79

38.82

AT5G18930

TaSAMDC4

TraesCS2A02G355400

2A:598161186–598162492

reverse

392

42.9

4.97

40.27

 

TaSAMDC5

TraesCS2B02G372900

2B:531466716–531467891

forward

391

42.7

4.92

39.43

 

TaSAMDC6

TraesCS5B02G220000

5B:394266417–394267595

forward

442

47.8

5.23

51.12

 

TaSAMDC7

TraesCS5D02G228900

5D:336223123–336224301

forward

285

NP

NP

55.12

Spermidine synthase

AT1G23820

TaSPDS

TraesCS7B02G163500

7B:225507362–225508913

forward

283

31.4

5.12

48.32

AT1G70310

        

Spermine synthase

AT5G53120

TaSPMS1

TraesCS5A02G172600

5A:365667504–365676095

reverse

385

41.9

5.56

44.15

 

TaSPMS2

TraesCS5B02G169900

5B:314299114–314308267

reverse

385

41.9

5.3

45.62

 

TaSPMS3

TraesCS5D02G177100

5D:276935715–276944280

reverse

387

42.3

5.74

39.33

 

TaSPMS4

TraesCS7B02G232700

7B:436081229–436087600

forward

401

44.7

8.23

43.87

 

TaSPMS5

TraesCS7A02G350100

7A:512759964–512765806

reverse

385

42.1

6.04

40.22

 

TaSPMS6

TraesCS7D02G328500

7D:420087353–420091292

forward

385

42

6.04

38.93

ACAULIS 5

AT5G19530

TaACL5–1

TraesCS7D02G094300

7D:56880436–56886021

forward

386

43.7

6.18

35.67

 

TaACL5–2

TraesCS4A02G398300

4A:673411559–673414121

forward

229

25.7

5.84

26.23

  1. MW Molecular weight (Da), pI Isoelectric point, NP Not predicted as the sequences contain numerous undefined AA, so pI and Mw cannot be computed