Table 1 Raw and filtered read statistics for the RNA-Seq experiment

Axenic (Rep 1)

27,337,042 For:13,668,521 Rev:13,668,521

4.10

44.02

26,288,598 For: 13,144,299 Rev: 13,144,299

3.56

43.32

96.16

Axenic (Rep 2)

29,222,012 For:14,622,006 Rev:14,622,006

4.38

43.99

27,979,572 For: 13,989,786 Rev:13,989,786

3.87

43.33

95.74

Axenic (Rep 3)

41,116,354 For:20,558,177 Rev:20,558,177

6.16

41.45

40,583,640 For: 20,291,820 Rev:20,291,820

6.06

41.44

98.71

Symbiotic (Rep 1)

33,448,662 For: 16,724,331 Rev:16,724,331

5.01

42.75

31,915,618 For: 15,957,809 Rev:15,957,809

4.38

41.87

95.42

Symbiotic (Rep 2)

36,100,070 For: 18,050,035 Rev:18,050,035

5.41

44.26

34,093,176 For: 17,046,588 Rev:17,046,588

4.59

43.41

94.44

Symbiotic (Rep 3)

40,100,056 For: 20,050,028 Rev:20,050,028

6.01

40.99

39,603,638 For: 19,801,819 Rev:19,801,819

5.90

40.96

98.76