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Table 4 List of genes/proteins important for host-symbiotic bacterial interaction selected based on GO (Gene Ontology) annotations

From: RNA-Sequencing of Heterorhabditis nematodes to identify factors involved in symbiosis with Photorhabdus bacteria

S. No

Gene/Protein (UniProt identifier)

S. No

Gene/Protein (UniProt identifier)

 

Lipid binding proteins (Immune surveillance and/or effectors)

 

Apoptosis, Autophagy and Endocytosis

1.

BPI (P17453)

41.

ced-1 (A8XMW6)

2.

LBP (Q2TBI0)

42.

ced-3 (P42573)

3.

DMBT1 (Q9UGM3)

43.

ced-4 (Q60Z52)

4.

CD36 (P26201)

44.

RNF216 (Q9NWF9)

 

Carbohydrate binding proteins (Immune surveillance and/or effectors)

45.

RAB14 (Q5ZKU5)

5.

lec-8 (Q09610)

46.

TIAL1 (Q01085)

6.

irg-7 (A0A131MBU3)

47.

ACD11 (O64587)

7.

CLEC4A (Q9UMR7)

48.

BCL3 (P20749)

8.

LGALS9 (Q3MHZ8)

49.

SKP2 (Q13309)

9.

LY75 (O60449)

50.

atg-16.2 (Q09406)

10.

CHID1 (Q5EAB4)

51.

lgg-1 (Q09490)

 

Kinases, Phosphatases and other protein adaptors (Signal transduction)

52.

lgg-2 Q23536)

11.

abl-1 (P03949)

53.

SYT11 (Q9BT88)

12.

kgb-1 (O44408)

54.

SQSTM1 (Q13501)

13.

mlk-1 (A0A0K3AV08)

55.

RUBCN (Q92622)

14.

sek-1 (G5EDF7)

56.

ILRUN (Q5F3N9)

15.

bsk (P92208)

57.

C3 (Q2UVX4_

16.

sma-6 (Q09488)

58.

faf (A0A0B4K7S0)

17.

dkf-2 (O45818)

59.

WASL (O00401)

18.

dapk-1 (O44997)

60.

DENND1B (Q6P3S1)

19.

ksr-1 (G5EFD2)

 

Lysozymes

20.

pkc-3 (A8WUG4)

61.

ilys-2 (O76358)

21.

MAPKBP1 (O60336)

62.

ilys-3 (O76357)

22.

vhp-1 (Q10038)

 

Peroxidases

23.

wun (Q9V576)

63.

bli-3 (O61213)

24.

PPM1D (O15297)

64.

hpx-2 (P90820)

25.

tir-1 (Q86DA5)

65.

skpo-1 (Q20616)

26.

sma-3 (P45896)

66.

gst-5 (Q09596)

27.

daf-7 (P92172)

67.

gstk-1 (Q09652)

28.

SMAD3 (P84022)

68.

GLO-3 (Q24JJ8)

 

Transcription factors

 

Transmembrane transporters

29.

daf-16 (O16850)

69.

pgp-1 (P34712)

30.

elt-2 (Q10655)

70.

pgp-3 (P34713)

31.

pnr (P52168)

71.

SLC17A5 (Q9NRA2)

32.

fos-1 (G5ECG2)

72.

aqp-10 (Q09369)

33.

TFEB (P19484)

73.

AQP3 (Q08DE6)

34.

PAX5 (Q02548)

 

Mucosa associated protein

 

Phospholipases (lipolytic)

74.

MALT1 (Q9UDY8)

35.

PLA2G1B (P00593)

75.

Cad99C (Q9VAF5)

36.

PLA2G6 (O60733)

76.

MR1 (C1ITJ8)

37.

plc-1 (G5EFI8)

 

Antimicrobial proteins

 

Metallopeptidases (proteolytic)

77.

acantho1 (Q8I948)

38.

spg-7 (Q9N3T5)

78.

Antimicrobial protein Ace-AMP1 (Q41258)

39.

zmp-2 (O44836)

79.

Venom serine protease inhibitor (A0A2R4SV19)

40.

ADAM8 (P78325)

80.

psidin (Q17DK2)