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Fig. 2 | BMC Genomics

Fig. 2

From: Quantitative analysis of transcriptome dynamics provides novel insights into developmental state transitions

Fig. 2

PCA and Time Series Analysis Reveal Novel Lineage-Specific Dynamics. A PCA for each individual lineage with the coordinates of PC1 and PC2 for each lineage plotted against developmental time. B PCA performed on all four lineages simultaneously, with plot showing clustering of all lineages for PC1 vs PC2. C Scree plot of the variance explained by the top10 principal components for PCA done on all lineages. D Distances from stage 9 to 13 for all 74 PCs for each lineage, error bars are SEM of all 9 stage 9–13 distances for each lineage, (***P < 0.005, **P < .01). E Number of genes differentially expressed between successive stages in each lineage, padj ≤ 0.05

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