Skip to main content
Fig. 5 | BMC Genomics

Fig. 5

From: Genome-wide association study uncovers major genetic loci associated with flowering time in response to active accumulated temperature in wild soybean population

Fig. 5

Haplotype analysis of aspartic peptidase at chromosome 4. A Zoom-out Manhattan plot of flowering days in average of 2 years at chromosome 4. The dotted lines represent the linkage disequibriurm (LD) (~ 23.09 kb) window surrounding the peaked SNP (Chr04:8545910). The red circle represents the lead SNP with -log10(p-value) = 33.59. B The relative gene expression levels of seven candidate genes within the LD window in 20 wild soybean accessions. The 20 accessions in two groups were characterized by their contrasting flowering days and each group contains 10 accessions. C The structure and haplotype analysis of the candidate genes with differential expression between the two groups. D Distribution of flowering time in six haplotypes of EDR1 (Glyma.04G096000.1). Different letters represent the significant levels at P < 0.05 based on one-way ANOVA

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us