Table 1 Nomenclature and characteristics of the putative basic leucine zipper (bZIP) proteins in C. paliurus
Proposed Gene Name | Gene ID | Genomic Location | Group | CDS length (bp) | Protein Length (aa) | Molecular Weight (kDa) | Isoelectric Point (pI) | GRAVY | Predicted subcellular localization |
|---|---|---|---|---|---|---|---|---|---|
CpbZIP1 | GWHPBEHY000088 | Chr01: 994,797–1,003,132 | A | 1,668 | 555 | 60.59 | 7.22 | -0.302 | Nucleus |
CpbZIP2 | GWHPBEHY001972 | Chr01: 24,506,959–24,507,579 | S | 621 | 206 | 23.69 | 7.29 | -0.804 | Nucleus |
CpbZIP3 | GWHPBEHY004160 | Chr02: 439,598–440,251 | S | 654 | 217 | 25.16 | 8.98 | -0.968 | Nucleus |
CpbZIP4 | GWHPBEHY005548 | Chr02: 13,209,182–13,212,986 | G | 1,314 | 437 | 46.99 | 7.23 | -0.741 | Nucleus |
CpbZIP5 | GWHPBEHY005552 | Chr02: 13,283,000–13,286,833 | G | 1,290 | 429 | 46.15 | 7.68 | -0.788 | Nucleus |
CpbZIP6 | GWHPBEHY009574 | Chr02: 61,166,874–61,170,387 | I | 1,059 | 352 | 39.44 | 6.29 | -0.709 | Nucleus |
CpbZIP7 | GWHPBEHY009820 | Chr03: 2,091,505–2,093,811 | C | 1,041 | 346 | 37.59 | 5.00 | -0.488 | Nucleus |
CpbZIP8 | GWHPBEHY010183 | Chr03: 6,108,011–6,108,409 | H | 399 | 132 | 15.28 | 8.65 | -0.677 | Nucleus |
CpbZIP9 | GWHPBEHY010213 | Chr03: 6,463,279–6,465,483 | I | 1,554 | 517 | 56.78 | 5.55 | -0.740 | Nucleus |
CpbZIP10 | GWHPBEHY010283 | Chr03: 7,074,975–7,076,579 | A | 996 | 331 | 36.80 | 8.84 | -0.360 | Nucleus |
CpbZIP11 | GWHPBEHY010475 | Chr03: 8,641,219–8,643,341 | K | 912 | 303 | 33.76 | 4.78 | -0.467 | Nucleus |
CpbZIP12 | GWHPBEHY011792 | Chr03: 22,656,275–22,660,159 | C | 1,002 | 333 | 36.46 | 5.08 | -0.867 | Nucleus |
CpbZIP13 | GWHPBEHY011812 | Chr03: 22,894,538–22,899,095 | C | 1,377 | 458 | 49.47 | 5.32 | -0.753 | Nucleus |
CpbZIP14 | GWHPBEHY011961 | Chr03: 24,496,682–24,497,748 | A | 696 | 231 | 26.24 | 8.12 | -0.408 | Nucleus |
CpbZIP15 | GWHPBEHY012394 | Chr03: 26,946,770–26,947,222 | H | 453 | 150 | 17.02 | 6.28 | -0.675 | Nucleus |
CpbZIP16 | GWHPBEHY017071 | Chr04: 32,605,904–32,610,064 | B | 2,349 | 782 | 84.42 | 5.93 | -0.460 | Nucleus |
CpbZIP17 | GWHPBEHY017112 | Chr04: 32,882,403–32,888,345 | D | 1,509 | 502 | 55.48 | 5.45 | -0.517 | Nucleus |
CpbZIP18 | GWHPBEHY017380 | Chr04: 34,526,769–34,532,759 | D | 1,344 | 447 | 50.48 | 6.79 | -0.687 | Nucleus |
CpbZIP19 | GWHPBEHY017617 | Chr05: 847,334–849,327 | A | 1,251 | 416 | 44.85 | 7.85 | -0.533 | Nucleus |
CpbZIP20 | GWHPBEHY017951 | Chr05: 4,125,825–4,129,365 | A | 888 | 295 | 32.34 | 6.28 | -0.662 | Nucleus |
CpbZIP21 | GWHPBEHY018195 | Chr05: 6,377,130–6,377,600 | H | 471 | 156 | 17.43 | 7.33 | -0.474 | Nucleus |
CpbZIP22 | GWHPBEHY018243 | Chr05: 6,861,500–6,872,183 | I | 4,116 | 1,371 | 151.88 | 6.33 | -0.510 | Nucleus |
CpbZIP23 | GWHPBEHY018315 | Chr05: 7,491,908–7,493,003 | F | 900 | 299 | 32.91 | 5.39 | -0.499 | Nucleus |
CpbZIP24 | GWHPBEHY018692 | Chr05: 11,574,685–11,575,188 | S | 504 | 167 | 19.62 | 6.05 | -0.948 | Nucleus |
CpbZIP25 | GWHPBEHY021408 | Chr05: 41,485,191–41,488,624 | D | 1,086 | 361 | 40.69 | 6.62 | -0.484 | Nucleus |
CpbZIP26 | GWHPBEHY021409 | Chr05: 41,496,649–41,504,793 | A | 924 | 307 | 34.70 | 7.23 | -0.455 | Nucleus |
CpbZIP27 | GWHPBEHY024306 | Chr06: 33,005,138–33,009,702 | G | 708 | 235 | 26.47 | 9.53 | -0.942 | Nucleus |
CpbZIP28 | GWHPBEHY025069 | Chr06: 41,919,023–41,920,834 | E | 957 | 318 | 35.08 | 6.18 | -0.652 | Nucleus |
CpbZIP29 | GWHPBEHY028595 | Chr07: 29,974,813–29,977,978 | B | 2,595 | 864 | 94.99 | 7.68 | -0.466 | Nucleus |
CpbZIP30 | GWHPBEHY028621 | Chr07: 30,201,808–30,210,020 | D | 1,383 | 460 | 50.84 | 6.25 | -0.563 | Nucleus |
CpbZIP31 | GWHPBEHY029014 | Chr08: 2,651,883–2,656,100 | C | 1,359 | 452 | 48.75 | 5.19 | -0.637 | Nucleus |
CpbZIP32 | GWHPBEHY031317 | Chr08: 30,344,410–30,354,480 | D | 1,104 | 367 | 41.60 | 5.80 | -0.449 | Nucleus |
CpbZIP33 | GWHPBEHY031880 | Chr09: 145,928–150,435 | E | 1,371 | 456 | 51.19 | 7.79 | -0.741 | Nucleus |
CpbZIP34 | GWHPBEHY032467 | Chr09: 5,883,134–5,883,730 | S | 597 | 198 | 22.83 | 5.46 | -0.857 | Nucleus |
CpbZIP35 | GWHPBEHY033340 | Chr09: 14,432,966–14,438,345 | D | 1,257 | 418 | 47.19 | 6.25 | -0.301 | Nucleus |
CpbZIP36 | GWHPBEHY034341 | Chr09: 24,011,411–24,013,541 | E | 966 | 321 | 36.14 | 5.43 | -0.873 | Nucleus |
CpbZIP37 | GWHPBEHY035033 | Chr10: 572,043–575,882 | D | 1,392 | 463 | 51.49 | 5.92 | -0.333 | Nucleus |
CpbZIP38 | GWHPBEHY035146 | Chr10: 1,682,996–1,684,115 | I | 858 | 285 | 31.19 | 8.28 | -0.538 | Nucleus |
CpbZIP39 | GWHPBEHY035968 | Chr10: 6,958,193–6,963,073 | A | 1,341 | 446 | 48.59 | 8.62 | -0.554 | Nucleus |
CpbZIP40 | GWHPBEHY035973 | Chr10: 6,974,416–6,985,398 | A | 2,385 | 794 | 87.24 | 6.80 | -0.404 | Nucleus |
CpbZIP41 | GWHPBEHY035975 | Chr10: 6,980,135–6,985,438 | A | 1,578 | 525 | 57.62 | 8.72 | -0.731 | Nucleus |
CpbZIP42 | GWHPBEHY038013 | Chr11: 3,495,809–3,503,252 | D | 1,593 | 530 | 59.12 | 6.26 | -0.412 | Nucleus |
CpbZIP43 | GWHPBEHY038367 | Chr11: 8,479,763–8,482,891 | A | 804 | 267 | 29.56 | 7.51 | -0.824 | Nucleus |
CpbZIP44 | GWHPBEHY038368 | Chr11: 8,481,990–8,482,906 | A | 828 | 275 | 31.04 | 8.17 | -0.568 | Nucleus |
CpbZIP45 | GWHPBEHY039260 | Chr11: 15,952,313–15,956,161 | I | 1,365 | 454 | 49.49 | 5.86 | -0.602 | Nucleus |
CpbZIP46 | GWHPBEHY039600 | Chr11: 17,721,343–17,724,747 | A | 1,059 | 352 | 39.35 | 7.98 | -0.700 | Nucleus |
CpbZIP47 | GWHPBEHY040320 | Chr11: 22,157,517–22,164,475 | S | 1,314 | 437 | 48.57 | 8.21 | -0.440 | Nucleus |
CpbZIP48 | GWHPBEHY040408 | Chr11: 22,749,325–22,751,704 | F | 915 | 304 | 33.65 | 5.58 | -0.520 | Nucleus |
CpbZIP49 | GWHPBEHY043047 | Chr12: 25,054,911–25,058,101 | I | 1,287 | 428 | 46.67 | 5.75 | -0.651 | Nucleus |
CpbZIP50 | GWHPBEHY043240 | Chr12: 27,099,469–27,100,317 | A | 849 | 282 | 31.35 | 5.82 | -0.731 | Nucleus |
CpbZIP51 | GWHPBEHY043284 | Chr12: 27,501,979–27,505,925 | E | 924 | 307 | 34.17 | 7.54 | -0.619 | Nucleus |
CpbZIP52 | GWHPBEHY043579 | Chr12: 30,467,364–30,474,038 | D | 1,317 | 438 | 48.56 | 6.13 | -0.462 | Nucleus |
CpbZIP53 | GWHPBEHY046497 | Chr15: 3,154,064–3,156,556 | E | 1,137 | 378 | 42.68 | 6.37 | -0.967 | Nucleus |
CpbZIP54 | GWHPBEHY046600 | Chr15: 4,251,322–4,251,798 | H | 477 | 158 | 17.62 | 7.88 | -0.504 | Nucleus |
CpbZIP55 | GWHPBEHY046675 | Chr15: 5,013,453–5,016,396 | I | 1,716 | 571 | 62.17 | 6.62 | -0.827 | Nucleus |
CpbZIP56 | GWHPBEHY046757 | Chr15: 5,662,618–5,664,166 | F | 975 | 324 | 35.70 | 5.86 | -0.733 | Nucleus |
CpbZIP57 | GWHPBEHY047010 | Chr15: 8,444,623–8,445,237 | S | 615 | 204 | 23.73 | 5.02 | -0.867 | Nucleus |
CpbZIP58 | GWHPBEHY050133 | Chr16: 21,457,004–21,460,361 | E | 969 | 322 | 35.84 | 6.90 | -0.827 | Nucleus |